Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 BDH2P1-201ENST00000602288 736 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC068790.4-201ENST00000602474 263 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC025946.2-201ENST00000603398 234 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC104458.1-201ENST00000608243 463 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AP002826.1-201ENST00000608835 315 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.03□□□□□ -1.76
PHGDHO43175 MIR7151-201ENST00000617477 60 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC011944.2-201ENST00000624440 683 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHGDHO43175 FAM35DP-201ENST00000323387 2712 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 BDP1P-201ENST00000582658 1990 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
PHGDHO43175 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
PHGDHO43175 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
PHGDHO43175 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PHGDHO43175 OR4G2P-202ENST00000641004 1759 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PHGDHO43175 XIAPP3-201ENST00000312918 795 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 RNU6-179P-201ENST00000363350 107 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 SNORA62.1-201ENST00000364287 154 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 SMIM11P1-201ENST00000369586 178 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 RNU4-25P-201ENST00000410569 230 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.02□□□□□ -1.77
PHGDHO43175 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.02□□□□□ -1.77
PHGDHO43175 RPL36AP6-201ENST00000435770 321 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.02□□□□□ -1.77
PHGDHO43175 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.02□□□□□ -1.77
PHGDHO43175 SNRPGP5-201ENST00000456003 220 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 MRPS17P3-201ENST00000465453 385 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 RN7SL303P-201ENST00000469773 251 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 AC083798.1-201ENST00000472671 131 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 RN7SL459P-201ENST00000481078 302 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 MTAPP1-201ENST00000489154 819 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 FAM92A1P2-202ENST00000504766 877 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.02□□□□□ -1.77
PHGDHO43175 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.02□□□□□ -1.77
PHGDHO43175 OR5AL2P-201ENST00000532185 920 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.02□□□□□ -1.77
PHGDHO43175 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.02□□□□□ -1.77
PHGDHO43175 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.02□□□□□ -1.77
PHGDHO43175 AL162413.1-201ENST00000603198 110 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 AP000907.4-201ENST00000604143 237 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 AL356218.2-201ENST00000605264 187 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PHGDHO43175 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PHGDHO43175 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
PHGDHO43175 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHGDHO43175 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 AL133412.1-201ENST00000380194 2992 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 MIR383-201ENST00000362257 73 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RNA5SP322-201ENST00000363617 119 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RNA5SP366-201ENST00000365454 123 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.01□□□□□ -1.77
PHGDHO43175 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RN7SKP140-201ENST00000411196 284 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RNU2-71P-201ENST00000411395 189 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 RPL23AP26-201ENST00000412728 464 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AMD1P2-201ENST00000412936 992 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.01□□□□□ -1.77
PHGDHO43175 AC087650.1-201ENST00000431445 468 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RPL7P28-201ENST00000437739 740 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.01□□□□□ -1.77
PHGDHO43175 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.01□□□□□ -1.77
PHGDHO43175 AC020550.1-201ENST00000447385 163 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.01□□□□□ -1.77
PHGDHO43175 AL356010.1-201ENST00000456364 102 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RNU7-182P-201ENST00000459009 62 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 RPS20P20-201ENST00000460498 340 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.01□□□□□ -1.77
PHGDHO43175 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.01□□□□□ -1.77
PHGDHO43175 AL359273.1-201ENST00000510918 627 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 SNORA40.12-201ENST00000516329 111 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.01□□□□□ -1.77
PHGDHO43175 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.01□□□□□ -1.77
PHGDHO43175 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.01□□□□□ -1.77
PHGDHO43175 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PHGDHO43175 RPS3AP4-201ENST00000555161 764 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.01□□□□□ -1.77
PHGDHO43175 AC022968.1-201ENST00000567372 442 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AC025627.2-201ENST00000576220 160 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 MIR3921-201ENST00000577308 85 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 MIR4284-201ENST00000578924 81 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 MIR5096-201ENST00000583713 70 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 DPPA3P3-201ENST00000603842 430 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AC010591.1-201ENST00000603941 649 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 AC114781.5-201ENST00000615297 108 ntBASIC4.01□□□□□ -1.77
PHGDHO43175 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms