Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL138955.1-201ENST00000622881 1040 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 MIR6733-201ENST00000635723 61 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC108206.1-201ENST00000570186 4159 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 RPL7P27-201ENST00000403775 720 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 RPS3AP24-201ENST00000407896 734 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC063976.3-201ENST00000426849 329 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL365496.1-201ENST00000426885 215 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL590233.1-201ENST00000430017 456 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL512844.2-201ENST00000433990 593 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC092427.1-201ENST00000439177 601 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL353691.1-201ENST00000451332 387 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL109741.2-201ENST00000455561 343 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 RNU7-23P-201ENST00000459465 62 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 HSPE1P6-201ENST00000479457 291 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 RPS15AP34-201ENST00000487776 387 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AIG1P1-201ENST00000503376 148 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC093752.1-206ENST00000511823 336 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC104417.1-201ENST00000523974 751 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC090888.1-201ENST00000561335 1141 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 TMF1P1-201ENST00000576058 373 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC007619.2-201ENST00000605743 379 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC006213.4-201ENST00000616184 634 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AP003476.1-201ENST00000623984 516 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 AC099654.8-201ENST00000637757 681 ntBASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TM9SF3Q9HD45 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 RNU6-76P-201ENST00000384060 104 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 RPS4XP8-201ENST00000402039 771 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 NDUFB4P7-201ENST00000423198 363 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AC019097.1-201ENST00000424783 735 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AL358075.3-201ENST00000426289 226 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 RPL39P6-201ENST00000448289 150 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 MTND2P24-201ENST00000453434 806 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AC104982.1-201ENST00000478775 574 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AC008427.1-201ENST00000503102 655 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AC008837.1-201ENST00000511513 412 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 MTCO3P15-201ENST00000526563 574 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 NDUFS5P6-201ENST00000529136 295 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AC079600.2-201ENST00000550076 130 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 DNAJC19P3-201ENST00000594491 331 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 AL157770.1-201ENST00000623049 439 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TM9SF3Q9HD45 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 MTCO1P9-201ENST00000505577 1534 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 RNU6-298P-201ENST00000390888 96 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 RNU6-1000P-201ENST00000391066 106 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL356057.2-201ENST00000403318 432 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL449283.1-202ENST00000418249 604 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL139413.1-201ENST00000421309 217 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 SEPT7P5-201ENST00000434048 306 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC009296.1-201ENST00000443146 155 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 RPS15AP27-201ENST00000449183 343 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC005297.2-201ENST00000450430 606 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 NIPA2P5-201ENST00000452282 464 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms