Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MTCYBP45-201ENST00000435243 565 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC027575.1-201ENST00000481064 460 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 LTV1P1-201ENST00000510683 1237 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC096725.1-201ENST00000514266 313 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 HAUS1P3-201ENST00000523909 662 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 CKS1BP1-201ENST00000555221 240 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC115989.2-201ENST00000578640 563 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC105224.1-201ENST00000587055 421 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 ELOCP35-201ENST00000604289 336 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC007619.2-201ENST00000605743 379 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AL021997.1-201ENST00000605757 193 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AC130650.2-201ENST00000618736 2403 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC019129.1-201ENST00000403786 261 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 OR9R1P-201ENST00000412200 877 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AL807761.1-201ENST00000417622 171 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 HMGB1P49-201ENST00000418882 569 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AL159987.2-201ENST00000432754 307 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 BMI1P1-201ENST00000445879 941 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 RNU5A-7P-201ENST00000515979 116 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 SCARNA3-201ENST00000517097 143 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC243972.3-201ENST00000539655 198 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AL391261.3-201ENST00000557194 520 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC008121.1-201ENST00000603244 268 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC013444.2-201ENST00000603317 787 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AL078605.1-201ENST00000603529 500 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC011374.2-201ENST00000607135 526 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AP002791.1-201ENST00000623291 381 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 AC068724.3-201ENST00000625906 87 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.42□□□□□ -2.18
VPS25Q9BRG1 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS25Q9BRG1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AL049641.1-201ENST00000441055 1948 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 SNORA48.5-201ENST00000391143 135 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 BTF3P7-201ENST00000407097 488 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 EDDM3CP-201ENST00000415977 425 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC244636.1-201ENST00000421152 228 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 RPS3AP44-201ENST00000425466 790 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AL512649.1-201ENST00000428997 581 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 RPS24P13-201ENST00000442520 397 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AL360221.1-201ENST00000445989 335 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC015724.1-201ENST00000478577 156 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC006499.5-201ENST00000505037 514 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 TRAV11-201ENST00000539512 339 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC022080.3-201ENST00000544433 482 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 MTCYBP23-201ENST00000558717 1102 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 LRRC37A5P-203ENST00000580181 585 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 CBX3P2-202ENST00000583365 535 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC068276.1-201ENST00000605793 379 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC107294.1-201ENST00000609524 467 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC090132.2-201ENST00000615881 347 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 MTND5P31-201ENST00000419366 1374 ntBASIC1.41□□□□□ -2.18
VPS25Q9BRG1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS25Q9BRG1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.4□□□□□ -2.18
VPS25Q9BRG1 RNU1-91P-201ENST00000364746 163 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 XGY1-201ENST00000381172 446 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 PTP4A1P7-201ENST00000423476 514 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 RPL35AP12-201ENST00000425362 338 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 RPS15AP28-201ENST00000435088 386 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 UBE2V1P5-201ENST00000440070 405 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 NUTF2P7-201ENST00000453086 375 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 RPS29P26-201ENST00000477483 171 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AC034222.1-201ENST00000494052 532 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms