Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 Y_RNA.399-201ENST00000383955 105 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 RNU6-1227P-201ENST00000383981 107 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 SNORA36C-201ENST00000384289 132 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 SNORA37-201ENST00000384504 129 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHDQ96IW2 RNU1-82P-201ENST00000390851 165 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AL121834.1-202ENST00000404494 277 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 HSPE1P8-201ENST00000406997 288 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 GPS2P1-201ENST00000411761 986 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC011933.1-201ENST00000413334 321 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.81□□□□□ -1.64
SHDQ96IW2 RPS12P10-201ENST00000427031 377 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 MTCO2P12-201ENST00000427426 682 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 GTF2IP13-201ENST00000438487 386 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 HMGB3P11-201ENST00000440127 604 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.81□□□□□ -1.64
SHDQ96IW2 AC010285.1-201ENST00000470580 392 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC108860.1-201ENST00000484521 383 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC110792.1-201ENST00000491826 472 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 RN7SL810P-201ENST00000493031 276 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AP001086.1-201ENST00000494882 321 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 SNORA31.3-201ENST00000516029 96 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 RNU6-273P-201ENST00000516937 96 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 RNA5SP230-201ENST00000517039 122 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.81□□□□□ -1.64
SHDQ96IW2 RN7SL290P-201ENST00000578661 300 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC127024.5-201ENST00000580085 462 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AL133215.3-201ENST00000609801 448 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.81□□□□□ -1.64
SHDQ96IW2 AC114781.5-201ENST00000615297 108 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC126177.8-201ENST00000618339 1015 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SHDQ96IW2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SHDQ96IW2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SHDQ96IW2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 AC104260.2-201ENST00000623551 3497 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 AP001273.1-201ENST00000624493 3152 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 DEFB108F-201ENST00000344638 222 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 RNU6-288P-201ENST00000363690 104 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 Y_RNA.167-201ENST00000363735 109 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHDQ96IW2 Y_RNA.419-201ENST00000384041 102 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 RNU6-629P-201ENST00000384061 103 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 RNU6-1297P-201ENST00000384415 104 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.8□□□□□ -1.64
SHDQ96IW2 AC074085.1-201ENST00000413598 418 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.8□□□□□ -1.64
SHDQ96IW2 BX682237.1-201ENST00000415016 335 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.8□□□□□ -1.64
SHDQ96IW2 RPS29P17-201ENST00000430795 166 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 PRDX3P3-201ENST00000447765 522 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 Y_RNA.682-201ENST00000516457 100 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 IGKV2D-23-201ENST00000518179 286 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.8□□□□□ -1.64
SHDQ96IW2 AC135001.1-201ENST00000544546 283 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 AC106785.1-201ENST00000565935 262 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 ARF4P1-201ENST00000605447 541 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 AC022893.3-201ENST00000607665 437 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 AL360181.4-201ENST00000621752 134 ntBASIC4.8□□□□□ -1.64
SHDQ96IW2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SHDQ96IW2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SHDQ96IW2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.8□□□□□ -1.64
SHDQ96IW2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.8□□□□□ -1.64
SHDQ96IW2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHDQ96IW2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SHDQ96IW2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SHDQ96IW2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 RNU6-1252P-201ENST00000363054 104 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 RNU6-14P-201ENST00000384630 106 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 SDHCP2-201ENST00000398565 501 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AL590004.1-201ENST00000405321 300 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AL513331.1-201ENST00000411908 397 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC092809.3-201ENST00000415453 231 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 AC079780.1-201ENST00000428259 207 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms