Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 MSL3P1-202ENST00000440028 1468 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC100778.3-201ENST00000580060 1750 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 U3.7-201ENST00000363668 216 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 SNORA70-201ENST00000384436 135 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 ENSAP1-201ENST00000392855 326 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC092447.6-201ENST00000414578 210 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AL035461.1-201ENST00000421490 332 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 RPL7L1P1-201ENST00000448259 785 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 U8.22-201ENST00000459141 133 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 RN7SL466P-201ENST00000497546 295 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 RNU1-86P-201ENST00000516108 154 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 MIR892C-201ENST00000516410 77 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 RNU1-107P-201ENST00000516617 154 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 MIR4505-201ENST00000582238 73 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AL691477.1-201ENST00000624398 162 ntBASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SCUBE3Q8IX30 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RNU6-1130P-201ENST00000365434 107 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.488-201ENST00000384403 102 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RNU6-658P-201ENST00000384606 106 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.569-201ENST00000384749 103 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.586-201ENST00000391146 98 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.623-201ENST00000411128 95 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 TMSB10P2-201ENST00000416049 131 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 BMS1P17-202ENST00000416720 316 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RNF10P1-201ENST00000418589 369 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 MTCO1P39-201ENST00000426148 480 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 TMEM183AP1-205ENST00000432739 290 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AC008267.6-201ENST00000441664 139 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RN7SL72P-201ENST00000460697 269 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AC010326.1-201ENST00000462726 602 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AC034236.1-201ENST00000469891 373 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RPL30P1-201ENST00000488676 339 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 OR7H2P-201ENST00000513483 306 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 IGKV2D-36-201ENST00000518643 226 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AL049872.1-201ENST00000556323 322 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 RPL23AP78-201ENST00000599928 470 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 AL450472.3-201ENST00000615578 367 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 MIR4275-201ENST00000636486 87 ntBASIC5.9□□□□□ -1.46
SCUBE3Q8IX30 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 AC144833.1-201ENST00000567953 4089 ntBASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SCUBE3Q8IX30 AL034546.1-201ENST00000623740 3693 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms