Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SCARNA24.1-201ENST00000516465 137 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RN7SKP209-201ENST00000516888 304 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 IGKV2-23-201ENST00000518729 323 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 SUB1P2-201ENST00000556401 297 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC068790.4-201ENST00000602474 263 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNU4-89P-201ENST00000607443 133 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 TUG1_2.1-201ENST00000614234 87 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHFQ7M4L6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 RNA5SP443-201ENST00000363083 132 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 RNY1P12-201ENST00000364251 105 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 U3.11-201ENST00000364476 212 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 SNORD6-201ENST00000365444 73 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 U1.1-201ENST00000384101 164 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 RNU6-456P-201ENST00000384493 107 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 MIR199A2-201ENST00000385289 110 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL391417.1-201ENST00000404100 426 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 RN7SKP159-201ENST00000410657 292 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 RPL26P29-201ENST00000415623 438 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL353193.1-201ENST00000421444 268 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 PPP1R11P2-201ENST00000423543 382 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 RPL23AP30-201ENST00000432419 501 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL662791.1-201ENST00000441992 928 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC016696.1-201ENST00000446949 318 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL162389.1-201ENST00000449233 177 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 RPS24P6-201ENST00000452670 400 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 HMGB3P30-201ENST00000457863 606 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AP000873.1-201ENST00000463987 400 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL049714.1-201ENST00000466686 347 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL121769.1-201ENST00000469473 401 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL049830.2-201ENST00000480072 201 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC009646.1-201ENST00000510455 318 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 HMGN1P28-201ENST00000521340 364 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 AK6P1-201ENST00000540219 478 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 YPEL5P3-201ENST00000547227 352 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 MIR4801-201ENST00000582704 82 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC024941.1-201ENST00000612250 334 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AL603758.1-201ENST00000618654 241 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC079684.1-201ENST00000621405 437 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 ELF2P3-201ENST00000445099 1506 ntBASIC3.42□□□□□ -1.86
SHFQ7M4L6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHFQ7M4L6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SHFQ7M4L6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 DDX10P1-201ENST00000448545 1933 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC004925.1-201ENST00000624256 2706 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHFQ7M4L6 RNU6-223P-201ENST00000362830 107 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 SNORD56.2-201ENST00000363242 71 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RNU6-108P-201ENST00000365558 107 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 RN7SKP285-201ENST00000410137 318 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RN7SKP177-201ENST00000410567 355 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHFQ7M4L6 RPL18P10-201ENST00000425606 538 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 MTCO1P39-201ENST00000426148 480 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 DPPA2P1-201ENST00000428060 556 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 TIMM9P3-201ENST00000428659 274 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RPS15AP9-201ENST00000439856 381 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC006480.1-201ENST00000449887 378 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 snoU13.24-201ENST00000458998 104 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AL672167.3-201ENST00000465951 960 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RN7SL459P-201ENST00000481078 302 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms