Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC009812.4-201ENST00000569134 1805 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
VSX2P58304 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.51□□□□□ -2.01
VSX2P58304 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 AC011460.1-201ENST00000636268 1834 ntBASIC2.5□□□□□ -2.01
VSX2P58304 SNORD62.1-201ENST00000362541 86 ntBASIC2.5□□□□□ -2.01
VSX2P58304 SNORA40.2-201ENST00000390847 128 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AL139039.1-201ENST00000401900 692 ntBASIC2.5□□□□□ -2.01
VSX2P58304 RPS4XP8-201ENST00000402039 771 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 RPLP0P7-201ENST00000416050 667 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 AC007435.1-201ENST00000421086 415 ntBASIC2.5□□□□□ -2.01
VSX2P58304 HMGN2P30-201ENST00000423237 256 ntBASIC2.5□□□□□ -2.01
VSX2P58304 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 RPL23AP74-201ENST00000437246 471 ntBASIC2.5□□□□□ -2.01
VSX2P58304 MRPL50P4-201ENST00000446432 475 ntBASIC2.5□□□□□ -2.01
VSX2P58304 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 OFD1P3Y-201ENST00000453312 783 ntBASIC2.5□□□□□ -2.01
VSX2P58304 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 MTCYBP16-201ENST00000509187 1129 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AC109464.2-201ENST00000510242 943 ntBASIC2.5□□□□□ -2.01
VSX2P58304 RNU6-1225P-201ENST00000516336 65 ntBASIC2.5□□□□□ -2.01
VSX2P58304 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 AC087373.1-201ENST00000524920 491 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.5□□□□□ -2.01
VSX2P58304 HSPE1P3-201ENST00000559254 309 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AP005205.1-201ENST00000563503 508 ntBASIC2.5□□□□□ -2.01
VSX2P58304 NRBF2P5-201ENST00000603087 788 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AC069304.2-201ENST00000605154 435 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AC025588.4-201ENST00000615802 908 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AC109454.4-201ENST00000623411 649 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AP003476.1-201ENST00000623984 516 ntBASIC2.5□□□□□ -2.01
VSX2P58304 CR381653.2-201ENST00000624041 768 ntBASIC2.5□□□□□ -2.01
VSX2P58304 AP003485.1-201ENST00000625093 753 ntBASIC2.5□□□□□ -2.01
VSX2P58304 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.5□□□□□ -2.01
VSX2P58304 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VSX2P58304 FRG1BP-201ENST00000278882 761 ntBASIC2.49□□□□□ -2.01
VSX2P58304 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.49□□□□□ -2.01
VSX2P58304 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
VSX2P58304 AC019178.2-201ENST00000423595 505 ntBASIC2.49□□□□□ -2.01
VSX2P58304 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC024082.2-201ENST00000434771 238 ntBASIC2.49□□□□□ -2.01
VSX2P58304 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.49□□□□□ -2.01
VSX2P58304 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.49□□□□□ -2.01
VSX2P58304 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.49□□□□□ -2.01
VSX2P58304 SUMO2P2-201ENST00000456482 255 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AL031183.1-201ENST00000457667 207 ntBASIC2.49□□□□□ -2.01
VSX2P58304 PNPLA4P1-201ENST00000458328 305 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC126389.1-201ENST00000477436 290 ntBASIC2.49□□□□□ -2.01
VSX2P58304 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
VSX2P58304 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VSX2P58304 TBCAP3-201ENST00000512475 312 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC017037.2-201ENST00000513850 890 ntBASIC2.49□□□□□ -2.01
VSX2P58304 CASP1P1-201ENST00000526345 212 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC118942.1-201ENST00000529674 1035 ntBASIC2.49□□□□□ -2.01
VSX2P58304 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.49□□□□□ -2.01
VSX2P58304 MIR3670-2-201ENST00000582974 65 ntBASIC2.49□□□□□ -2.01
VSX2P58304 MIR3670-1-201ENST00000584160 65 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC015688.2-201ENST00000584523 262 ntBASIC2.49□□□□□ -2.01
VSX2P58304 MIR3670-3-201ENST00000584855 65 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AL031176.1-201ENST00000604554 466 ntBASIC2.49□□□□□ -2.01
VSX2P58304 MIR3670-4-201ENST00000612260 65 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AC123767.1-202ENST00000620407 817 ntBASIC2.49□□□□□ -2.01
VSX2P58304 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
VSX2P58304 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VSX2P58304 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
VSX2P58304 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
VSX2P58304 NACA3P-201ENST00000359690 648 ntBASIC2.48□□□□□ -2.01
VSX2P58304 RNU6-1000P-201ENST00000391066 106 ntBASIC2.48□□□□□ -2.01
VSX2P58304 AL356057.2-201ENST00000403318 432 ntBASIC2.48□□□□□ -2.01
VSX2P58304 AL356131.1-201ENST00000405826 414 ntBASIC2.48□□□□□ -2.01
VSX2P58304 USP9YP20-201ENST00000419224 558 ntBASIC2.48□□□□□ -2.01
VSX2P58304 BEND7P1-201ENST00000422058 457 ntBASIC2.48□□□□□ -2.01
VSX2P58304 USP9YP22-201ENST00000438971 294 ntBASIC2.48□□□□□ -2.01
VSX2P58304 RPL26P6-201ENST00000440913 438 ntBASIC2.48□□□□□ -2.01
VSX2P58304 AL049829.1-201ENST00000465411 156 ntBASIC2.48□□□□□ -2.01
VSX2P58304 SRIP1-201ENST00000489235 288 ntBASIC2.48□□□□□ -2.01
VSX2P58304 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.48□□□□□ -2.01
VSX2P58304 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.48□□□□□ -2.01
VSX2P58304 AC113420.1-201ENST00000507903 571 ntBASIC2.48□□□□□ -2.01
VSX2P58304 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.48□□□□□ -2.01
VSX2P58304 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.48□□□□□ -2.01
VSX2P58304 MTND5P4-201ENST00000514978 288 ntBASIC2.48□□□□□ -2.01
VSX2P58304 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VSX2P58304 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.48□□□□□ -2.01
VSX2P58304 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.48□□□□□ -2.01
VSX2P58304 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.48□□□□□ -2.01
VSX2P58304 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.48□□□□□ -2.01
VSX2P58304 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.48□□□□□ -2.01
VSX2P58304 AC004853.1-201ENST00000604902 698 ntBASIC2.48□□□□□ -2.01
VSX2P58304 AC112220.2-201ENST00000605513 533 ntBASIC2.48□□□□□ -2.01
VSX2P58304 AL138955.1-201ENST00000622881 1040 ntBASIC2.48□□□□□ -2.01
VSX2P58304 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms