Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMNB1P20700 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.37□□□□□ -1.55
LMNB1P20700 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.37□□□□□ -1.55
LMNB1P20700 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.37□□□□□ -1.55
LMNB1P20700 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.37□□□□□ -1.55
LMNB1P20700 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.37□□□□□ -1.55
LMNB1P20700 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.36□□□□□ -1.55
LMNB1P20700 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.36□□□□□ -1.55
LMNB1P20700 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.36□□□□□ -1.55
LMNB1P20700 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 Y_RNA.100-201ENST00000363141 102 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 RNU6-1078P-201ENST00000364522 103 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 Y_RNA.378-201ENST00000365652 113 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 RNU6-43P-201ENST00000384302 107 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 SNORD116-29-201ENST00000384516 83 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LMNB1P20700 RNU6-278P-201ENST00000390945 109 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC097374.1-203ENST00000400783 485 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 U3.35-201ENST00000408405 208 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 RNA5SP107-201ENST00000411358 122 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 AC093106.2-201ENST00000428212 385 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 COX6B1P7-201ENST00000430845 235 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.36□□□□□ -1.55
LMNB1P20700 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 BRK1P2-201ENST00000442875 223 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 RPS3AP12-201ENST00000443616 753 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC020550.1-201ENST00000447385 163 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.36□□□□□ -1.55
LMNB1P20700 AC083904.1-201ENST00000487828 231 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC106872.2-201ENST00000494303 480 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 HIGD1AP3-201ENST00000515857 278 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 RNA5SP503-201ENST00000517047 117 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 FAM60DP-201ENST00000524174 632 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 SETP7-201ENST00000552169 453 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 HSPE1P5-201ENST00000561489 272 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.36□□□□□ -1.55
LMNB1P20700 MIR4716-201ENST00000579628 84 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AL160281.1-201ENST00000605307 311 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AL627309.6-201ENST00000606857 840 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.36□□□□□ -1.55
LMNB1P20700 AC006329.2-201ENST00000611491 394 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.36□□□□□ -1.55
LMNB1P20700 MTND4LP32-201ENST00000636111 270 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 ZNF734P-201ENST00000419494 1534 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.36□□□□□ -1.55
LMNB1P20700 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMNB1P20700 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.36□□□□□ -1.55
LMNB1P20700 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMNB1P20700 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMNB1P20700 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
LMNB1P20700 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LMNB1P20700 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMNB1P20700 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LMNB1P20700 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LMNB1P20700 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.35□□□□□ -1.55
LMNB1P20700 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LMNB1P20700 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMNB1P20700 RNA5SP119-201ENST00000362715 117 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 SNORD42.2-201ENST00000365570 69 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.35□□□□□ -1.55
LMNB1P20700 RNU6-474P-201ENST00000384243 107 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.35□□□□□ -1.55
LMNB1P20700 AL161631.1-201ENST00000417933 486 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 CYCSP10-201ENST00000417973 294 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.35□□□□□ -1.55
LMNB1P20700 AC236972.2-201ENST00000434979 310 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 RPS3AP52-201ENST00000435639 297 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 AC005094.1-201ENST00000440420 368 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMNB1P20700 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.35□□□□□ -1.55
LMNB1P20700 RPS15AP36-201ENST00000492022 382 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 AC135721.1-201ENST00000497954 479 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.35□□□□□ -1.55
LMNB1P20700 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.35□□□□□ -1.55
LMNB1P20700 AC005868.1-201ENST00000536421 331 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 DYNLL1P4-201ENST00000549314 266 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.35□□□□□ -1.55
LMNB1P20700 MIR5685-201ENST00000579080 79 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 MIR3171-201ENST00000584270 74 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 BNIP3P25-201ENST00000596023 559 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 AC007179.3-201ENST00000604976 235 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMNB1P20700 AL359757.2-201ENST00000624309 274 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LMNB1P20700 AL133243.3-201ENST00000617415 3004 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.35□□□□□ -1.55
LMNB1P20700 AL049555.1-201ENST00000562834 1933 ntBASIC5.35□□□□□ -1.55
LMNB1P20700 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms