Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC092427.1-202ENST00000430569 476 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 NANOGP2-201ENST00000435391 727 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 GTF2IP7-202ENST00000436677 309 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 UBBP3-201ENST00000445497 241 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 NDUFA5P7-201ENST00000452914 242 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 RPL21P131-201ENST00000497298 483 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 OR5H5P-201ENST00000503164 928 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC098799.2-201ENST00000509466 868 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 SCARNA1-201ENST00000517138 166 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AP001646.1-201ENST00000527936 915 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC087276.1-201ENST00000529659 480 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 OR8K4P-201ENST00000534608 872 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC125611.2-201ENST00000551907 647 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC105137.2-201ENST00000569073 466 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC074051.3-201ENST00000570238 358 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 VN1R83P-201ENST00000595685 445 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 BNIP3P40-201ENST00000596017 556 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AP003973.1-201ENST00000604639 691 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL157392.4-201ENST00000609756 345 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL138478.1-201ENST00000612252 832 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTDNEP1O95476 RNU6-1249P-201ENST00000363237 111 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 SNORD56.5-201ENST00000364281 72 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 RNU6-657P-201ENST00000383904 107 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 SNORD116-12-201ENST00000384468 92 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 MIR649-201ENST00000384843 97 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 RNU4-22P-201ENST00000411058 166 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 RPL23AP20-201ENST00000447965 421 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 AC104073.1-201ENST00000451988 151 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 SNORA48.10-201ENST00000516965 160 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 ERHP1-201ENST00000523006 310 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 MIR4509-3-201ENST00000578671 94 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 COX6CP3-201ENST00000580869 223 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 MIR4509-2-201ENST00000583920 94 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 MTND3P19-201ENST00000603825 345 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 RPL23AP88-201ENST00000605759 454 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 RNU4-5P-201ENST00000607255 135 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 MIR4509-1-201ENST00000618224 94 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 AL360181.4-201ENST00000621752 134 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 AC090772.4-201ENST00000623599 362 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 AC095031.1-201ENST00000623685 672 ntBASIC2.61□□□□□ -1.99
CTDNEP1O95476 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
CTDNEP1O95476 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTDNEP1O95476 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 HMGB1P5-201ENST00000255320 642 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 RNU6-1242P-201ENST00000391052 103 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC107081.1-201ENST00000414975 361 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 UBE2D3P2-201ENST00000424409 445 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 MTCO1P3-201ENST00000429327 192 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 SEPT7P5-201ENST00000434048 306 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC104435.1-201ENST00000483483 166 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC079203.1-201ENST00000487972 404 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 AP001372.4-201ENST00000524889 472 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 OR10V3P-201ENST00000525712 725 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AP001317.1-201ENST00000531194 960 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 MTCYBP23-201ENST00000558717 1102 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AL049838.1-201ENST00000563647 981 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 MIR5002-201ENST00000584713 97 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC026790.2-201ENST00000606282 430 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AL355810.1-201ENST00000614629 552 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC025034.2-201ENST00000623264 286 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 ZNF663P-202ENST00000641770 1131 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 SGO1P2-201ENST00000429458 1589 ntBASIC2.6□□□□□ -1.99
CTDNEP1O95476 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTDNEP1O95476 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CTDNEP1O95476 AC106754.1-201ENST00000562632 1513 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms