Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 ZNF204P-201ENST00000416749 2397 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
GFRA3O60609 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.59□□□□□ -1.52
GFRA3O60609 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
GFRA3O60609 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
GFRA3O60609 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.58□□□□□ -1.52
GFRA3O60609 AP001541.1-201ENST00000623322 1904 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
GFRA3O60609 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GFRA3O60609 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 AC008957.3-201ENST00000624112 2242 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
GFRA3O60609 AC112243.1-201ENST00000623949 3851 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 MIR578-201ENST00000384828 96 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 RNU6-972P-201ENST00000391208 107 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 LAP3P1-201ENST00000403648 294 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 AC009237.10-201ENST00000414112 510 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 RPS15AP40-201ENST00000419621 391 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 RPL18P10-201ENST00000425606 538 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA3O60609 U8.21-201ENST00000459536 136 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 RPL7AP28-201ENST00000464513 571 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.58□□□□□ -1.52
GFRA3O60609 AC026402.1-201ENST00000513642 170 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 RNU6-567P-201ENST00000516746 107 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 AC100767.1-201ENST00000528178 123 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA3O60609 AC027667.1-201ENST00000545814 304 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.58□□□□□ -1.52
GFRA3O60609 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA3O60609 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.58□□□□□ -1.52
GFRA3O60609 AC004832.5-201ENST00000608677 401 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 AL442128.1-201ENST00000615151 90 ntBASIC5.58□□□□□ -1.52
GFRA3O60609 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
GFRA3O60609 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.58□□□□□ -1.52
GFRA3O60609 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GFRA3O60609 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA3O60609 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 AC004158.1-201ENST00000564508 4319 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.57□□□□□ -1.52
GFRA3O60609 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
GFRA3O60609 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 MIR488-201ENST00000365739 83 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 RNU6-880P-201ENST00000384526 107 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 RNU6-14P-201ENST00000384630 106 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 SNORA11.2-201ENST00000408318 127 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 RNU2-50P-201ENST00000410494 143 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AC005154.2-201ENST00000438110 379 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 HMGN2P32-201ENST00000444648 269 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AC104073.1-201ENST00000451988 151 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA3O60609 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
GFRA3O60609 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
GFRA3O60609 COX7A2P2-201ENST00000505291 250 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA3O60609 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.57□□□□□ -1.52
GFRA3O60609 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 MIR3646-201ENST00000578301 84 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
GFRA3O60609 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 SRGNP1-201ENST00000603392 451 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AC069294.1-201ENST00000608397 350 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.57□□□□□ -1.52
GFRA3O60609 AC062029.1-202ENST00000606164 3651 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 AL136531.3-201ENST00000624378 3658 ntBASIC5.57□□□□□ -1.52
GFRA3O60609 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA3O60609 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA3O60609 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
GFRA3O60609 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA3O60609 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA3O60609 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA3O60609 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA3O60609 AC232271.1-201ENST00000602455 2715 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms