Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DEFB108D-201ENST00000527787 222 ntBASIC3.34□□□□□ -1.87
TO15178 AP000873.5-201ENST00000533906 236 ntBASIC3.34□□□□□ -1.87
TO15178 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AL356432.3-201ENST00000568952 465 ntBASIC3.34□□□□□ -1.87
TO15178 MTCO3P24-201ENST00000572729 782 ntBASIC3.34□□□□□ -1.87
TO15178 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
TO15178 AC121334.2-201ENST00000605387 271 ntBASIC3.34□□□□□ -1.87
TO15178 AC087752.4-201ENST00000605911 462 ntBASIC3.34□□□□□ -1.87
TO15178 AC007038.2-201ENST00000608095 740 ntBASIC3.34□□□□□ -1.87
TO15178 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TO15178 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.87
TO15178 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TO15178 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.34□□□□□ -1.87
TO15178 AL390237.1-201ENST00000404226 1415 ntBASIC3.34□□□□□ -1.88
TO15178 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TO15178 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TO15178 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.33□□□□□ -1.88
TO15178 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TO15178 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TO15178 ZNF285B-201ENST00000561698 1767 ntBASIC3.33□□□□□ -1.88
TO15178 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.33□□□□□ -1.88
TO15178 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TO15178 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TO15178 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
TO15178 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TO15178 RNU5E-8P-201ENST00000363502 116 ntBASIC3.33□□□□□ -1.88
TO15178 RNA5SP42-201ENST00000364278 115 ntBASIC3.33□□□□□ -1.88
TO15178 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TO15178 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TO15178 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
TO15178 MIR184-201ENST00000384962 84 ntBASIC3.33□□□□□ -1.88
TO15178 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TO15178 RNU6-278P-201ENST00000390945 109 ntBASIC3.33□□□□□ -1.88
TO15178 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.33□□□□□ -1.88
TO15178 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.33□□□□□ -1.88
TO15178 SYF2P2-201ENST00000417620 583 ntBASIC3.33□□□□□ -1.88
TO15178 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.33□□□□□ -1.88
TO15178 CYCSP4-201ENST00000429682 331 ntBASIC3.33□□□□□ -1.88
TO15178 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.33□□□□□ -1.88
TO15178 FTH1P1-201ENST00000437933 532 ntBASIC3.33□□□□□ -1.88
TO15178 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.33□□□□□ -1.88
TO15178 AL592447.1-201ENST00000447592 540 ntBASIC3.33□□□□□ -1.88
TO15178 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.33□□□□□ -1.88
TO15178 SSXP1-201ENST00000453640 473 ntBASIC3.33□□□□□ -1.88
TO15178 RNU6-956P-201ENST00000458868 103 ntBASIC3.33□□□□□ -1.88
TO15178 RNU7-59P-201ENST00000459101 61 ntBASIC3.33□□□□□ -1.88
TO15178 AC135721.1-201ENST00000497954 479 ntBASIC3.33□□□□□ -1.88
TO15178 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.33□□□□□ -1.88
TO15178 AC010424.1-201ENST00000506336 297 ntBASIC3.33□□□□□ -1.88
TO15178 ARL2BPP6-201ENST00000512757 439 ntBASIC3.33□□□□□ -1.88
TO15178 RN7SKP18-201ENST00000516005 275 ntBASIC3.33□□□□□ -1.88
TO15178 AC022616.6-201ENST00000520479 119 ntBASIC3.33□□□□□ -1.88
TO15178 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.33□□□□□ -1.88
TO15178 AP000857.1-201ENST00000532151 543 ntBASIC3.33□□□□□ -1.88
TO15178 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.33□□□□□ -1.88
TO15178 AC007115.1-201ENST00000546853 234 ntBASIC3.33□□□□□ -1.88
TO15178 MED28P6-201ENST00000558776 231 ntBASIC3.33□□□□□ -1.88
TO15178 AL845331.3-202ENST00000562856 261 ntBASIC3.33□□□□□ -1.88
TO15178 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.33□□□□□ -1.88
TO15178 AC034105.4-201ENST00000568304 277 ntBASIC3.33□□□□□ -1.88
TO15178 AC005771.1-201ENST00000585581 349 ntBASIC3.33□□□□□ -1.88
TO15178 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.33□□□□□ -1.88
TO15178 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.33□□□□□ -1.88
TO15178 RN7SKP299-201ENST00000606679 301 ntBASIC3.33□□□□□ -1.88
TO15178 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.33□□□□□ -1.88
TO15178 AC090970.3-201ENST00000612566 866 ntBASIC3.33□□□□□ -1.88
TO15178 AC092140.2-201ENST00000618027 521 ntBASIC3.33□□□□□ -1.88
TO15178 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TO15178 CR392039.5-201ENST00000623201 510 ntBASIC3.33□□□□□ -1.88
TO15178 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
TO15178 AC010733.2-201ENST00000589496 5702 ntBASIC3.33□□□□□ -1.88
TO15178 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TO15178 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TO15178 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TO15178 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.33□□□□□ -1.88
TO15178 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TO15178 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TO15178 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TO15178 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TO15178 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TO15178 SNORD9-201ENST00000362566 104 ntBASIC3.32□□□□□ -1.88
TO15178 RNU6-283P-201ENST00000364788 107 ntBASIC3.32□□□□□ -1.88
TO15178 RNU6-76P-201ENST00000384060 104 ntBASIC3.32□□□□□ -1.88
TO15178 Y_RNA.553-201ENST00000384670 102 ntBASIC3.32□□□□□ -1.88
TO15178 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TO15178 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
TO15178 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
TO15178 HMGN1P14-201ENST00000412459 517 ntBASIC3.32□□□□□ -1.88
TO15178 USP9YP13-201ENST00000417797 480 ntBASIC3.32□□□□□ -1.88
TO15178 HSPE1P1-201ENST00000421494 318 ntBASIC3.32□□□□□ -1.88
TO15178 PPP1R11P2-201ENST00000423543 382 ntBASIC3.32□□□□□ -1.88
TO15178 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.32□□□□□ -1.88
TO15178 GOT2P5-201ENST00000433995 546 ntBASIC3.32□□□□□ -1.88
TO15178 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.32□□□□□ -1.88
TO15178 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TO15178 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TO15178 AP000936.2-201ENST00000447151 681 ntBASIC3.32□□□□□ -1.88
TO15178 MTND1P29-201ENST00000448112 647 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms