Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
USP17L4A6NCW7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC097063.1-201ENST00000426714 1797 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 Y_RNA.188-201ENST00000363952 111 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 RNU6-45P-201ENST00000384471 107 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AL590704.1-201ENST00000402856 794 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 RNU6-712P-201ENST00000410558 100 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 COX5BP7-201ENST00000414780 274 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC079809.1-201ENST00000415468 276 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AL160275.3-201ENST00000423876 471 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AL591212.2-201ENST00000433923 257 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 snoU13.3-201ENST00000459441 104 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 RPL31P60-201ENST00000478450 367 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 AC005899.2-201ENST00000584353 90 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.81□□□□□ -1.48
USP17L4A6NCW7 THAP12P5-201ENST00000405864 2275 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 OR56B2P-202ENST00000641377 2453 ntBASIC5.81□□□□□ -1.48
USP17L4A6NCW7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 Y_RNA.480-201ENST00000384364 102 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 Y_RNA.496-201ENST00000384444 101 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 RNU6-306P-201ENST00000384617 107 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 RNU6-837P-201ENST00000391056 108 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 SSXP9-201ENST00000417503 292 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AL162591.2-201ENST00000449634 317 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 HMGB3P30-201ENST00000457863 606 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 CYCSP34-201ENST00000458172 304 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 RPS27AP13-201ENST00000498403 237 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AC022493.2-201ENST00000506122 481 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 RN7SKP258-201ENST00000517151 304 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 OR8R1P-201ENST00000543943 764 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AC040958.1-201ENST00000561102 201 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 SNORA74C-1-201ENST00000580726 201 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 AC005592.1-201ENST00000566527 1640 ntBASIC5.8□□□□□ -1.48
USP17L4A6NCW7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L4A6NCW7 TLK1P1-201ENST00000456760 2440 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AL158163.1-201ENST00000603915 1649 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 Y_RNA.574-201ENST00000384766 95 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AC004975.1-201ENST00000428733 208 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 RPL23AP50-201ENST00000434149 455 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 RPS17P8-201ENST00000434525 335 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AC084198.1-201ENST00000477747 402 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AP000926.1-201ENST00000479573 241 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 HMGB1P30-201ENST00000492455 606 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 RN7SL558P-201ENST00000497468 299 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.79□□□□□ -1.48
USP17L4A6NCW7 SCARNA16.2-201ENST00000516520 172 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 RNU6-264P-201ENST00000517134 104 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 Y_RNA.721-201ENST00000517207 102 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AC083837.1-201ENST00000565297 2994 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 RN7SL652P-201ENST00000577769 300 ntBASIC5.79□□□□□ -1.48
USP17L4A6NCW7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms