Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PCDHGA9Q9Y5G4 AC103710.2-202ENST00000641454 2853 ntBASIC4.23□□□□□ -1.73
PCDHGA9Q9Y5G4 EOGT-210ENST00000615922 1931 ntBASIC4.23□□□□□ -1.73
PCDHGA9Q9Y5G4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC092435.4-201ENST00000623012 4159 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU6-50P-201ENST00000362356 103 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 Y_RNA.38-201ENST00000362617 102 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU1-64P-201ENST00000365443 163 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SNORA24.1-201ENST00000384401 135 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RN7SKP140-201ENST00000411196 284 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC068533.1-201ENST00000418542 415 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RPS12P10-201ENST00000427031 377 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 TXNP1-201ENST00000441872 371 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RPL37P6-201ENST00000460682 294 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RN7SL98P-201ENST00000462271 300 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RPS29P25-201ENST00000481709 171 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC108078.2-201ENST00000510750 236 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC026402.1-201ENST00000513642 170 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RNA5SP401-201ENST00000515920 127 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 MRPL49P2-201ENST00000521066 465 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AF235103.2-201ENST00000525753 346 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AP006587.4-201ENST00000526053 529 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 RANP3-201ENST00000530970 276 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 OR5D17P-201ENST00000531492 978 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC008945.2-201ENST00000606056 604 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 ZYXP1-201ENST00000617638 118 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 DUXAP9-208ENST00000622815 614 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AP003122.6-201ENST00000623831 495 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 AC006065.6-201ENST00000625201 545 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA9Q9Y5G4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGA9Q9Y5G4 AC139713.2-215ENST00000641428 5037 ntBASIC4.21□□□□□ -1.73
PCDHGA9Q9Y5G4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PCDHGA9Q9Y5G4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGA9Q9Y5G4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AL139276.1-201ENST00000311910 1001 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC067945.1-201ENST00000342609 618 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-600P-201ENST00000362524 99 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-61P-201ENST00000365528 109 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 SMIM11P1-201ENST00000369586 178 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AL354719.1-201ENST00000406535 843 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC114491.1-201ENST00000416095 246 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AL451054.2-201ENST00000420896 202 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 FTH1P6-201ENST00000430768 320 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 BTF3P10-201ENST00000433415 495 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC073415.1-201ENST00000449240 153 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC091153.1-201ENST00000466297 402 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL7P19-201ENST00000469948 618 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 TRBV1-201ENST00000476502 284 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC091167.1-201ENST00000492017 396 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL38P4-201ENST00000502376 214 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC091885.1-201ENST00000506658 268 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 SLC25A15P5-201ENST00000508033 253 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 STMN1P2-201ENST00000508435 439 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-927P-201ENST00000516199 100 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 RNA5SP468-201ENST00000516782 93 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 ADI1P3-201ENST00000549509 470 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC022968.1-201ENST00000567372 442 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC024619.4-201ENST00000580924 316 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms