Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AC104581.5-201ENST00000624171 7141 ntBASIC9.85□□□□□ -0.83
SENP3Q9H4L4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.85□□□□□ -0.83
SENP3Q9H4L4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC9.85□□□□□ -0.83
SENP3Q9H4L4 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SENP3Q9H4L4 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SENP3Q9H4L4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 RN7SKP23-201ENST00000625159 4301 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 U3.52-201ENST00000384034 216 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 SNORA68-201ENST00000384437 133 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 IGHV5-78-201ENST00000450948 295 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 SNORD11-201ENST00000459124 84 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 AL390726.5-202ENST00000564800 256 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 AC018692.3-201ENST00000623929 123 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 AP003972.1-201ENST00000625192 5446 ntBASIC9.84□□□□□ -0.83
SENP3Q9H4L4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
SENP3Q9H4L4 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 ADAM3A-203ENST00000461344 2157 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 OR51A10P-201ENST00000307165 937 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 RNA5SP512-201ENST00000364550 120 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 Y_RNA.360-201ENST00000365512 102 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 AC108479.1-201ENST00000431142 427 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 RN7SL160P-201ENST00000468558 284 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 RN7SL797P-201ENST00000486314 297 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 AC090255.1-201ENST00000495779 349 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 MIR2681-201ENST00000581814 105 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 AL355333.1-201ENST00000605632 279 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 SNORD96A-201ENST00000606577 79 ntBASIC9.83□□□□□ -0.84
SENP3Q9H4L4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SENP3Q9H4L4 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 BCLAF1P2-201ENST00000624956 2609 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 Y_RNA.155-201ENST00000363632 101 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 SNORD45B-201ENST00000364617 72 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 U8.17-201ENST00000391292 132 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 AL663061.1-201ENST00000416625 580 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 COX4I1P2-201ENST00000447446 547 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 RNU7-6P-201ENST00000516845 62 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 AC005562.2-201ENST00000618264 111 ntBASIC9.82□□□□□ -0.84
SENP3Q9H4L4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC9.82□□□□□ -0.84
SENP3Q9H4L4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 MIR548A2-201ENST00000384956 97 ntBASIC9.81□□□□□ -0.84
SENP3Q9H4L4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC9.81□□□□□ -0.84
SENP3Q9H4L4 UQCRHP1-204ENST00000424609 274 ntBASIC9.81□□□□□ -0.84
SENP3Q9H4L4 AC027124.2-201ENST00000428249 105 ntBASIC9.81□□□□□ -0.84
SENP3Q9H4L4 BX323845.2-201ENST00000458382 234 ntBASIC9.81□□□□□ -0.84
SENP3Q9H4L4 AC114781.3-201ENST00000512083 142 ntBASIC9.81□□□□□ -0.84
SENP3Q9H4L4 CKS1BP7-201ENST00000522230 235 ntBASIC9.81□□□□□ -0.84
SENP3Q9H4L4 TCL6_2.1-201ENST00000615162 119 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms