Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
GAFA1Q96PS6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.28□□□□□ -2.2
GAFA1Q96PS6 ERHP1-201ENST00000523006 310 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 AC083923.1-201ENST00000523708 376 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 AP004371.1-201ENST00000525240 214 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.28□□□□□ -2.2
GAFA1Q96PS6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.28□□□□□ -2.2
GAFA1Q96PS6 AC012493.3-201ENST00000604494 112 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 AP004372.1-201ENST00000604842 844 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 uc_338.5-201ENST00000611839 155 ntBASIC1.28□□□□□ -2.2
GAFA1Q96PS6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.28□□□□□ -2.2
GAFA1Q96PS6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
GAFA1Q96PS6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 FAM133CP-201ENST00000332869 704 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RNU6-1159P-201ENST00000362933 107 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RNU6-1181P-201ENST00000384191 106 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 MIR517C-201ENST00000385103 95 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RNA5SP213-201ENST00000391031 106 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AL030996.1-201ENST00000411430 235 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 POLHP1-201ENST00000411806 470 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 ZNF90P2-204ENST00000419323 1075 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AL513185.2-201ENST00000425543 193 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC023347.2-201ENST00000433994 462 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 MRPS33P4-201ENST00000434892 317 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RPL31P20-201ENST00000449593 360 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AL035407.2-201ENST00000454090 378 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RPS15AP34-201ENST00000487776 387 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 KLRA1P-201ENST00000503499 986 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 RN7SKP277-201ENST00000516895 283 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 HMGB1P46-201ENST00000520062 610 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AP005435.4-201ENST00000529514 284 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 HMGB1P24-202ENST00000615653 685 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AC110079.1-202ENST00000635213 138 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 AL356118.1-201ENST00000635272 1078 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 MIR4496-201ENST00000635896 61 ntBASIC1.27□□□□□ -2.21
GAFA1Q96PS6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
GAFA1Q96PS6 HMGB1P5-201ENST00000255320 642 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 MIR320B1-201ENST00000390209 79 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 SNORA67.5-201ENST00000391036 107 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 MIR1304-201ENST00000408243 91 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AL445669.1-201ENST00000426743 755 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AL512661.1-201ENST00000434586 1253 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 BZW1P2-201ENST00000473537 826 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AL135752.1-201ENST00000479477 471 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC021146.7-201ENST00000509604 775 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC109464.2-201ENST00000510242 943 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AGGF1P5-201ENST00000567900 919 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC090897.2-201ENST00000581715 130 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC096586.2-201ENST00000610260 441 ntBASIC1.26□□□□□ -2.21
GAFA1Q96PS6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
GAFA1Q96PS6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
GAFA1Q96PS6 AC103710.2-202ENST00000641454 2853 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 SNORA3A-201ENST00000364113 130 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 RNU6-461P-201ENST00000364195 107 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 RNU6-60P-201ENST00000364792 103 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 DNAJC19P6-201ENST00000401853 280 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 RNU2-17P-201ENST00000410290 190 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.25□□□□□ -2.21
GAFA1Q96PS6 BNIP3P2-201ENST00000441221 577 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 OR10R1P-201ENST00000441524 1141 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 AL136380.1-201ENST00000447970 162 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 SETP11-201ENST00000473027 690 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 RPL23AP41-201ENST00000484754 458 ntBASIC1.25□□□□□ -2.21
GAFA1Q96PS6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.25□□□□□ -2.21
GAFA1Q96PS6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms