Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
HLA-CQ95604 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-CQ95604 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-CQ95604 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HLA-CQ95604 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HLA-CQ95604 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-CQ95604 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 AC020656.2-201ENST00000613291 5309 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-CQ95604 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 AP004607.3-201ENST00000530354 3915 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 TNPO1P2-201ENST00000426249 2665 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 INTS6P1-201ENST00000504674 2530 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HLA-CQ95604 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 MIR133B-201ENST00000362210 119 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 Y_RNA.8-201ENST00000362353 102 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RN7SKP104-201ENST00000362605 328 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-37P-201ENST00000362692 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-11P-201ENST00000364234 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-7-201ENST00000364784 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-8-201ENST00000365467 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-827P-201ENST00000365553 106 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-25P-201ENST00000383873 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-1-201ENST00000383898 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 Y_RNA.405-201ENST00000383979 100 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-36P-201ENST00000384172 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 Y_RNA.451-201ENST00000384200 100 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-4P-201ENST00000384205 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-5P-201ENST00000384238 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-3P-201ENST00000384314 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-16P-201ENST00000384385 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-15P-201ENST00000384534 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 Y_RNA.524-201ENST00000384564 100 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-2-201ENST00000384627 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-29P-201ENST00000384637 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 Y_RNA.561-201ENST00000384694 100 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-9-201ENST00000384776 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HLA-CQ95604 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-837P-201ENST00000391056 108 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-CQ95604 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-CQ95604 AC011753.3-201ENST00000443436 406 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 snoU13.20-201ENST00000459180 104 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RPS23P2-201ENST00000463671 415 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 AC022133.1-201ENST00000490961 571 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 AC008897.1-201ENST00000494006 347 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-612P-201ENST00000516909 102 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 MIR5095-201ENST00000578844 88 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.84□□□□□ -1.47
HLA-CQ95604 AC011447.4-201ENST00000587562 111 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RNU6-6P-201ENST00000606623 107 ntBASIC5.84□□□□□ -1.47
HLA-CQ95604 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-CQ95604 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-CQ95604 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-CQ95604 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
HLA-CQ95604 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-CQ95604 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-CQ95604 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.83□□□□□ -1.48
HLA-CQ95604 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-CQ95604 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 RN7SKP227-201ENST00000364445 330 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 SNORA36C-201ENST00000384289 132 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-CQ95604 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-CQ95604 TOMM20P4-201ENST00000427861 435 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 AL358472.1-201ENST00000431295 329 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-CQ95604 KNOP1P3-201ENST00000446933 426 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-CQ95604 HSPE1P25-201ENST00000455484 251 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 RN7SL817P-201ENST00000480777 288 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 AC004980.4-201ENST00000513375 203 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 NDUFB4P11-201ENST00000560510 395 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 BNIP3P5-201ENST00000562290 498 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 AC090617.3-201ENST00000573670 475 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-CQ95604 AC011487.3-201ENST00000593607 453 ntBASIC5.83□□□□□ -1.48
HLA-CQ95604 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-CQ95604 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-CQ95604 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-CQ95604 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HLA-CQ95604 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-CQ95604 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms