Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU4-1-201ENST00000363925 141 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 MTND4LP20-201ENST00000402379 270 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.83□□□□□ -1.64
RTF1Q92541 USP9YP27-201ENST00000418455 438 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AL139413.1-201ENST00000421309 217 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 MTCO1P20-201ENST00000425366 358 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AC008065.1-201ENST00000428525 348 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 OR51AB1P-201ENST00000429046 620 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.83□□□□□ -1.64
RTF1Q92541 AL671855.1-201ENST00000446875 1203 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 RPL23AP20-201ENST00000447965 421 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 BX276092.4-201ENST00000452056 248 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 MTCO2P29-201ENST00000465212 189 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 OR5H5P-201ENST00000503164 928 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.83□□□□□ -1.64
RTF1Q92541 AC010587.1-201ENST00000505809 469 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.83□□□□□ -1.64
RTF1Q92541 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 AC011451.2-201ENST00000604303 598 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AC103858.2-201ENST00000621471 543 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AC244100.1-202ENST00000621554 382 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AC079597.1-201ENST00000624306 508 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 AP000553.6-201ENST00000641242 118 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RTF1Q92541 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.83□□□□□ -1.64
RTF1Q92541 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTF1Q92541 AC009902.3-201ENST00000606235 2172 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTF1Q92541 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTF1Q92541 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.82□□□□□ -1.64
RTF1Q92541 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC018555.1-201ENST00000567548 1980 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC011460.1-201ENST00000636268 1834 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 Y_RNA.89-201ENST00000363031 102 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 RNU6-1090P-201ENST00000364065 94 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 RNU6-534P-201ENST00000364877 106 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 RNU6-282P-201ENST00000365357 103 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 Y_RNA.409-201ENST00000383990 98 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTF1Q92541 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 RNU2-15P-201ENST00000410692 191 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC004987.3-201ENST00000413879 771 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC138393.2-201ENST00000414742 246 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.82□□□□□ -1.64
RTF1Q92541 ATP5HP2-201ENST00000433885 485 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 UBE2V1P13-201ENST00000436983 439 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 USP9YP15-201ENST00000442391 422 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.82□□□□□ -1.64
RTF1Q92541 HMGB3P22-202ENST00000451823 572 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 SNORD105B-201ENST00000458770 79 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 S100A11P1-201ENST00000477525 312 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC117522.1-201ENST00000509821 380 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 RN7SKP277-201ENST00000516895 283 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC107934.1-201ENST00000522215 217 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AP003072.2-201ENST00000527756 676 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AP000907.2-201ENST00000530827 353 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC008011.1-201ENST00000545989 227 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.82□□□□□ -1.64
RTF1Q92541 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.82□□□□□ -1.64
RTF1Q92541 UBE2L4-201ENST00000587688 464 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC008752.3-201ENST00000588113 712 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC010591.1-201ENST00000603941 649 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AP001330.5-201ENST00000607176 411 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 U3.45-201ENST00000607547 219 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC019176.2-201ENST00000611579 315 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC012150.2-201ENST00000621300 544 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AL158801.5-201ENST00000623123 465 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 AC139792.3-201ENST00000623525 224 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RTF1Q92541 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
RTF1Q92541 ZNF734P-201ENST00000419494 1534 ntBASIC4.82□□□□□ -1.64
RTF1Q92541 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.81□□□□□ -1.64
RTF1Q92541 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTF1Q92541 MAPK10-373ENST00000641983 6772 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 OR5J1P-201ENST00000313544 939 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 RNVU1-3-201ENST00000364313 161 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTF1Q92541 AC093578.1-201ENST00000415219 368 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.81□□□□□ -1.64
RTF1Q92541 AC245054.1-201ENST00000420944 258 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.81□□□□□ -1.64
RTF1Q92541 AC019097.1-201ENST00000424783 735 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 ZNF863P-201ENST00000426746 417 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms