Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL121871.1-201ENST00000443413 436 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 SSXP5-201ENST00000443473 287 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 OR6K5P-201ENST00000447050 945 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 MTCO1P27-201ENST00000448269 226 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC092754.2-201ENST00000463506 460 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 OR2A20P-203ENST00000498397 1268 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC093809.1-201ENST00000509155 340 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 SYF2P1-201ENST00000550658 413 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AL158211.1-201ENST00000566763 763 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC005000.2-201ENST00000605468 310 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC007318.2-201ENST00000620999 243 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC095031.1-201ENST00000623685 672 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LRRC77P-213ENST00000637727 880 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 FRG1BP-201ENST00000278882 761 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-173P-201ENST00000364215 104 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-744P-201ENST00000365557 107 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RNA5SP88-201ENST00000365560 109 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 Y_RNA.548-201ENST00000384656 105 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 BX119904.4-201ENST00000424402 301 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC004866.2-201ENST00000438285 481 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 LSM1P1-201ENST00000438629 273 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RAC1P7-201ENST00000445367 377 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AL606662.1-201ENST00000445763 553 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RPL30P9-201ENST00000465586 330 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 S100A11P2-201ENST00000467589 312 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC108860.1-201ENST00000484521 383 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC034159.1-201ENST00000513885 583 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 MTND5P4-201ENST00000514978 288 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 SNORA31.8-201ENST00000516327 108 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-528P-201ENST00000516926 100 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC007536.1-201ENST00000533382 349 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 OR7K1P-201ENST00000546439 926 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC055876.1-202ENST00000567053 138 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 ISCA1P3-201ENST00000577104 373 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 VN1R90P-201ENST00000595717 726 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC011451.2-201ENST00000604303 598 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC072039.2-201ENST00000608883 439 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AC002550.2-201ENST00000621246 394 ntBASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf40Q8IXQ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.97
C9orf40Q8IXQ3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC092447.10-201ENST00000620607 1652 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 Y_RNA.18-201ENST00000362461 102 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RNU6-433P-201ENST00000363216 104 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RNU1-140P-201ENST00000365040 165 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RNU6-359P-201ENST00000365466 108 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 SNORA46-201ENST00000384762 135 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 MIR591-201ENST00000385290 95 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RPS3AP26-201ENST00000398259 784 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL590084.2-201ENST00000401481 382 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RNU2-43P-201ENST00000410306 190 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RPL7P8-201ENST00000411964 730 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RAP1BP1-201ENST00000412709 553 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC245054.2-201ENST00000415639 319 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 CCDC58P2-201ENST00000417131 366 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms