Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RNU5F-7P-201ENST00000363696 115 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RNA5SP50-201ENST00000363731 107 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RNU6-1119P-201ENST00000384349 108 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RNU6-809P-201ENST00000384461 107 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RN7SKP285-201ENST00000410137 318 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC007899.1-201ENST00000412776 775 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 EI24P1-201ENST00000416584 867 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AL353777.1-201ENST00000425552 326 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 USP9YP12-201ENST00000450481 570 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC004801.2-202ENST00000463559 283 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 HMGB1P22-201ENST00000505315 124 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 FCF1P8-201ENST00000510322 597 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC005921.1-201ENST00000510589 286 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RNU6-528P-201ENST00000516926 100 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC107934.2-201ENST00000518653 310 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 CR383656.7-201ENST00000548164 174 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 MIR3922-201ENST00000585192 84 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 RMST_8.1-201ENST00000610287 165 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC122108.2-201ENST00000611946 526 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 HULC.1-201ENST00000612720 240 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC010678.1-201ENST00000614118 713 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AL590099.1-201ENST00000615276 138 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC018755.4-201ENST00000619715 454 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 AC011460.1-201ENST00000636268 1834 ntBASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNE3Q6ZMZ3 ZNF826P-207ENST00000622273 1910 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 TEX21P-201ENST00000447107 1476 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 RNU4-35P-201ENST00000362588 141 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 SNORD17-201ENST00000390930 237 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 DEFB108C-201ENST00000400154 252 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 RN7SKP111-201ENST00000410349 271 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 Y_RNA.598-201ENST00000410480 95 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AL359704.1-201ENST00000411586 781 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC017079.2-201ENST00000416102 485 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AL049734.2-201ENST00000441066 616 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC112653.1-201ENST00000443851 386 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC008264.1-201ENST00000447612 367 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AL590365.1-201ENST00000450788 243 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 RPS20P32-201ENST00000456044 356 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 RPL7P23-201ENST00000493874 747 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 MTND4LP18-201ENST00000526864 291 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC022146.1-201ENST00000595307 847 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC108479.2-201ENST00000617314 601 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC012150.2-201ENST00000621300 544 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 AC079597.1-201ENST00000624306 508 ntBASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNE3Q6ZMZ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 MIR30E-201ENST00000362104 92 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 RNU6-297P-201ENST00000384636 107 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AL138880.1-201ENST00000405824 642 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 RN7SKP27-201ENST00000410684 333 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AC078974.1-201ENST00000411597 223 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AC126124.2-201ENST00000413542 321 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 OR1AA1P-201ENST00000419597 916 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AP000907.1-201ENST00000428428 510 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AL022238.1-201ENST00000442557 355 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 MRPS31P2-201ENST00000451581 518 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AC007967.1-201ENST00000455422 1159 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AC078918.1-201ENST00000498515 228 ntBASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4□□□□□ -1.77
SYNE3Q6ZMZ3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms