Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC015720.1-201ENST00000565251 277 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AP000787.2-201ENST00000604432 568 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1□□□□□ -2.25
UBR4Q5T4S7 RPS15AP6-201ENST00000420703 385 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1□□□□□ -2.25
UBR4Q5T4S7 AC007229.1-201ENST00000590455 412 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1□□□□□ -2.25
UBR4Q5T4S7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 Y_RNA.204-201ENST00000364112 102 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RNU6-174P-201ENST00000410406 106 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 MIR5002-201ENST00000584713 97 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 SNRPGP17-201ENST00000603780 214 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 snoU109.1-201ENST00000459339 135 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RNU4-60P-201ENST00000517239 135 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 IMMP1LP2-201ENST00000552954 492 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RNU6-60P-201ENST00000364792 103 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RNA5SP129-201ENST00000410276 118 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 AP003467.2-201ENST00000520175 319 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 CYP3A137P-201ENST00000562436 69 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 AL645944.1-201ENST00000603857 493 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UBR4Q5T4S7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RNU6-1064P-201ENST00000410626 104 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RPL21P2-201ENST00000440049 481 ntBASIC0.99□□□□□ -2.25
UBR4Q5T4S7 RNU1-87P-201ENST00000363727 170 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 RAC1P3-201ENST00000416129 580 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 CBWD4P-201ENST00000445695 655 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC121758.2-201ENST00000553271 193 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 RMST_6.1-201ENST00000611980 203 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 RPL23AP61-201ENST00000623642 466 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC010680.1-201ENST00000590024 3590 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 SSR1P1-201ENST00000407630 814 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC017078.1-201ENST00000416146 368 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 JTBP1-201ENST00000441314 247 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 CYCSP23-201ENST00000519781 313 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 HMGN1P28-201ENST00000521340 364 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC025281.1-201ENST00000567026 265 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 HMGN2P18-201ENST00000450680 270 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AL121877.1-201ENST00000453704 622 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
UBR4Q5T4S7 RNY3P14-201ENST00000384309 102 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC012181.1-201ENST00000479895 423 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 AC097468.3-201ENST00000607956 456 ntBASIC0.98□□□□□ -2.25
UBR4Q5T4S7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC108059.3-201ENST00000456388 214 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AMD1P1-201ENST00000457220 922 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 IGLVI-20-201ENST00000519296 130 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 HMGB1P41-201ENST00000520234 440 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RNU1-138P-201ENST00000384093 164 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RPL36AP33-201ENST00000450395 310 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RN7SL274P-201ENST00000492268 272 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 VWA8P1-201ENST00000510889 176 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RN7SKP265-201ENST00000516448 223 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RNU6-700P-201ENST00000391043 107 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC087373.1-201ENST00000524920 491 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC078899.5-201ENST00000612475 178 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 FO624990.1-201ENST00000636373 85 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RNA5SP27-201ENST00000363839 119 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 U8.8-201ENST00000365399 135 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 MIR153-2-201ENST00000385225 87 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC090774.1-201ENST00000435925 246 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 snoU13.11-201ENST00000459219 104 ntBASIC0.97□□□□□ -2.25
UBR4Q5T4S7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR4Q5T4S7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms