Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR375-201ENST00000362103 64 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 RN7SKP160-201ENST00000363804 340 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 Y_RNA.348-201ENST00000365403 103 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 RNU6-213P-201ENST00000384051 104 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 RNU11-4P-201ENST00000391149 133 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AL591034.1-201ENST00000407447 340 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC005154.2-201ENST00000438110 379 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 SDC4P-201ENST00000453285 601 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 RN7SL799P-201ENST00000475891 298 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 RNU6-390P-201ENST00000516259 103 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 RNU6-914P-201ENST00000516749 109 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 RN7SKP272-201ENST00000516988 232 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC060766.3-201ENST00000591442 263 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 uc_338.28-201ENST00000612082 187 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VARS2Q5ST30 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VARS2Q5ST30 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
VARS2Q5ST30 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC092079.1-201ENST00000558620 1985 ntBASIC6.33□□□□□ -1.4
VARS2Q5ST30 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VARS2Q5ST30 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VARS2Q5ST30 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.33□□□□□ -1.4
VARS2Q5ST30 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU4-9P-201ENST00000364951 139 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU6-1131P-201ENST00000364955 107 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU6-36P-201ENST00000384172 107 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU6-49P-201ENST00000384256 107 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU6-16P-201ENST00000384385 107 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU6-15P-201ENST00000384534 107 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU6-1179P-201ENST00000384667 107 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AL121835.1-201ENST00000404250 354 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNU2-21P-201ENST00000410368 188 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 AC063979.1-201ENST00000415539 377 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AC007568.1-201ENST00000422912 471 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AP000907.1-201ENST00000428428 510 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 RN7SKP49-201ENST00000516675 260 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 RNA5SP34-201ENST00000516887 130 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 AC091078.2-201ENST00000557145 559 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AC044860.2-201ENST00000561005 179 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 AL589674.2-201ENST00000604304 337 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 AF127577.6-201ENST00000623352 2191 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 AC140479.2-201ENST00000421567 3130 ntBASIC6.32□□□□□ -1.4
VARS2Q5ST30 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6.32□□□□□ -1.4
VARS2Q5ST30 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARS2Q5ST30 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 AC010329.1-201ENST00000593903 8328 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 RNU6-961P-201ENST00000363893 105 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 RNU1-130P-201ENST00000363930 160 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 RNU1-139P-201ENST00000391307 165 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 SPTLC1P2-201ENST00000407089 121 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 RN7SKP151-201ENST00000410230 316 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 Y_RNA.595-201ENST00000410403 105 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 HMGA1P8-201ENST00000414130 321 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 AL117339.3-201ENST00000418733 162 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 BPY2DP-201ENST00000422208 265 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 AC053481.1-201ENST00000467217 306 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 MIR892C-201ENST00000516410 77 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 AC008694.2-201ENST00000517591 306 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 HMGN2P36-201ENST00000529541 409 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 MIR3646-201ENST00000578301 84 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 AC069294.1-201ENST00000608397 350 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 AP002799.1-201ENST00000623552 423 ntBASIC6.31□□□□□ -1.4
VARS2Q5ST30 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms