Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 AC104850.1-201ENST00000435940 476 ntBASIC4.1□□□□□ -1.75
COPAP53621 RPL35AP22-201ENST00000436855 335 ntBASIC4.1□□□□□ -1.75
COPAP53621 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
COPAP53621 AL662791.1-201ENST00000441992 928 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 AC108059.3-201ENST00000456388 214 ntBASIC4.1□□□□□ -1.75
COPAP53621 RNU7-59P-201ENST00000459101 61 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 AC026801.2-201ENST00000515352 425 ntBASIC4.1□□□□□ -1.75
COPAP53621 SNORA31.20-201ENST00000517111 133 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.1□□□□□ -1.75
COPAP53621 AP000857.1-201ENST00000532151 543 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 AC124947.2-202ENST00000552735 133 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 AL592436.1-201ENST00000605135 558 ntBASIC4.1□□□□□ -1.75
COPAP53621 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
COPAP53621 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COPAP53621 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COPAP53621 AC039056.2-201ENST00000622261 511 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC124864.2-201ENST00000624736 186 ntBASIC4.1□□□□□ -1.75
COPAP53621 U6.98-201ENST00000637157 84 ntBASIC4.1□□□□□ -1.75
COPAP53621 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPAP53621 BDP1P-201ENST00000582658 1990 ntBASIC4.1□□□□□ -1.75
COPAP53621 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COPAP53621 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
COPAP53621 AL645937.1-201ENST00000641739 1652 ntBASIC4.1□□□□□ -1.75
COPAP53621 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 AC004925.1-201ENST00000624256 2706 ntBASIC4.09□□□□□ -1.75
COPAP53621 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.09□□□□□ -1.75
COPAP53621 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
COPAP53621 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 RNU6-213P-201ENST00000384051 104 ntBASIC4.09□□□□□ -1.75
COPAP53621 U1.1-201ENST00000384101 164 ntBASIC4.09□□□□□ -1.75
COPAP53621 RPL17P50-201ENST00000396131 546 ntBASIC4.09□□□□□ -1.75
COPAP53621 MIR548F1-201ENST00000408667 84 ntBASIC4.09□□□□□ -1.75
COPAP53621 RNU2-43P-201ENST00000410306 190 ntBASIC4.09□□□□□ -1.75
COPAP53621 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.09□□□□□ -1.75
COPAP53621 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AC007390.1-201ENST00000415722 356 ntBASIC4.09□□□□□ -1.75
COPAP53621 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 FCF1P1-201ENST00000432690 571 ntBASIC4.09□□□□□ -1.75
COPAP53621 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.09□□□□□ -1.75
COPAP53621 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 RPL36AP13-201ENST00000457490 317 ntBASIC4.09□□□□□ -1.75
COPAP53621 RNU7-170P-201ENST00000459303 61 ntBASIC4.09□□□□□ -1.75
COPAP53621 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.09□□□□□ -1.75
COPAP53621 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AC135721.1-201ENST00000497954 479 ntBASIC4.09□□□□□ -1.75
COPAP53621 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
COPAP53621 HMGB1P29-201ENST00000505659 499 ntBASIC4.09□□□□□ -1.75
COPAP53621 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 Vault.3-201ENST00000516676 95 ntBASIC4.09□□□□□ -1.75
COPAP53621 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.09□□□□□ -1.75
COPAP53621 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.09□□□□□ -1.75
COPAP53621 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.09□□□□□ -1.75
COPAP53621 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.09□□□□□ -1.75
COPAP53621 AL133153.1-201ENST00000557756 303 ntBASIC4.09□□□□□ -1.75
COPAP53621 MIR98-201ENST00000606724 119 ntBASIC4.09□□□□□ -1.75
COPAP53621 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 AF250324.2-201ENST00000608299 610 ntBASIC4.09□□□□□ -1.75
COPAP53621 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.09□□□□□ -1.75
COPAP53621 AC245517.5-201ENST00000611529 162 ntBASIC4.09□□□□□ -1.75
COPAP53621 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.09□□□□□ -1.75
COPAP53621 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 MIR6863-201ENST00000636112 90 ntBASIC4.09□□□□□ -1.75
COPAP53621 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
COPAP53621 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPAP53621 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 RNY3P13-201ENST00000365542 102 ntBASIC4.08□□□□□ -1.76
COPAP53621 MTHFD2P2-201ENST00000407725 247 ntBASIC4.08□□□□□ -1.76
COPAP53621 RNU6ATAC-201ENST00000408749 126 ntBASIC4.08□□□□□ -1.76
COPAP53621 RNU2-62P-201ENST00000410868 191 ntBASIC4.08□□□□□ -1.76
COPAP53621 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.08□□□□□ -1.76
COPAP53621 AMD1P2-201ENST00000412936 992 ntBASIC4.08□□□□□ -1.76
COPAP53621 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms