Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
USP11P51784 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 AC032011.1-201ENST00000611703 1549 ntBASIC5.28□□□□□ -1.56
USP11P51784 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USP11P51784 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USP11P51784 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 RNU1-83P-201ENST00000363426 164 ntBASIC5.27□□□□□ -1.57
USP11P51784 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 Y_RNA.473-201ENST00000384333 102 ntBASIC5.27□□□□□ -1.57
USP11P51784 Y_RNA.576-201ENST00000384781 102 ntBASIC5.27□□□□□ -1.57
USP11P51784 MIR192-201ENST00000384915 110 ntBASIC5.27□□□□□ -1.57
USP11P51784 RNU6-1109P-201ENST00000391187 107 ntBASIC5.27□□□□□ -1.57
USP11P51784 SDHCP2-201ENST00000398565 501 ntBASIC5.27□□□□□ -1.57
USP11P51784 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.27□□□□□ -1.57
USP11P51784 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 SALL4P2-201ENST00000423288 2910 ntBASIC5.27□□□□□ -1.57
USP11P51784 RPL23AP89-201ENST00000439324 255 ntBASIC5.27□□□□□ -1.57
USP11P51784 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USP11P51784 RPS26P56-201ENST00000444468 240 ntBASIC5.27□□□□□ -1.57
USP11P51784 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 TDGF1P1-201ENST00000445734 527 ntBASIC5.27□□□□□ -1.57
USP11P51784 CYCSP34-201ENST00000458172 304 ntBASIC5.27□□□□□ -1.57
USP11P51784 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
USP11P51784 RNU6-699P-201ENST00000517081 110 ntBASIC5.27□□□□□ -1.57
USP11P51784 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.27□□□□□ -1.57
USP11P51784 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.27□□□□□ -1.57
USP11P51784 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
USP11P51784 U2.1-201ENST00000618978 145 ntBASIC5.27□□□□□ -1.57
USP11P51784 AC103705.1-201ENST00000619013 241 ntBASIC5.27□□□□□ -1.57
USP11P51784 MIR7703-201ENST00000620784 77 ntBASIC5.27□□□□□ -1.57
USP11P51784 AC025034.2-201ENST00000623264 286 ntBASIC5.27□□□□□ -1.57
USP11P51784 AL136313.1-201ENST00000624804 202 ntBASIC5.27□□□□□ -1.57
USP11P51784 U6.114-201ENST00000636407 96 ntBASIC5.27□□□□□ -1.57
USP11P51784 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
USP11P51784 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP11P51784 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.26□□□□□ -1.57
USP11P51784 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
USP11P51784 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP11P51784 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP11P51784 AP000756.2-201ENST00000624168 2567 ntBASIC5.26□□□□□ -1.57
USP11P51784 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
USP11P51784 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 SNORD3E-201ENST00000362899 217 ntBASIC5.26□□□□□ -1.57
USP11P51784 RNU6-99P-201ENST00000364721 107 ntBASIC5.26□□□□□ -1.57
USP11P51784 RNU6-61P-201ENST00000365528 109 ntBASIC5.26□□□□□ -1.57
USP11P51784 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP11P51784 RNU6-1226P-201ENST00000384317 107 ntBASIC5.26□□□□□ -1.57
USP11P51784 SNORA24.1-201ENST00000384401 135 ntBASIC5.26□□□□□ -1.57
USP11P51784 RNU6-328P-201ENST00000390887 106 ntBASIC5.26□□□□□ -1.57
USP11P51784 RNU4-25P-201ENST00000410569 230 ntBASIC5.26□□□□□ -1.57
USP11P51784 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 RPS26P2-201ENST00000440331 348 ntBASIC5.26□□□□□ -1.57
USP11P51784 AC011753.3-201ENST00000443436 406 ntBASIC5.26□□□□□ -1.57
USP11P51784 PCNPP5-201ENST00000452246 481 ntBASIC5.26□□□□□ -1.57
USP11P51784 ISCUP1-201ENST00000454451 448 ntBASIC5.26□□□□□ -1.57
USP11P51784 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 AC006463.2-201ENST00000473326 348 ntBASIC5.26□□□□□ -1.57
USP11P51784 AC087879.1-201ENST00000474343 374 ntBASIC5.26□□□□□ -1.57
USP11P51784 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.26□□□□□ -1.57
USP11P51784 AC068781.1-201ENST00000488231 618 ntBASIC5.26□□□□□ -1.57
USP11P51784 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 Y_RNA.721-201ENST00000517207 102 ntBASIC5.26□□□□□ -1.57
USP11P51784 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.26□□□□□ -1.57
USP11P51784 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 MIR4330-201ENST00000579077 105 ntBASIC5.26□□□□□ -1.57
USP11P51784 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.26□□□□□ -1.57
USP11P51784 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 AC009229.3-201ENST00000608056 282 ntBASIC5.26□□□□□ -1.57
USP11P51784 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.26□□□□□ -1.57
USP11P51784 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
USP11P51784 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP11P51784 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP11P51784 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
USP11P51784 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.26□□□□□ -1.57
USP11P51784 AL158163.1-201ENST00000603915 1649 ntBASIC5.26□□□□□ -1.57
USP11P51784 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP11P51784 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 AC108751.5-201ENST00000492880 1336 ntBASIC5.25□□□□□ -1.57
USP11P51784 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.25□□□□□ -1.57
USP11P51784 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
USP11P51784 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP11P51784 AC126323.6-202ENST00000568092 3511 ntBASIC5.25□□□□□ -1.57
USP11P51784 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms