Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC010329.2-201ENST00000595195 2737 ntBASIC1.49□□□□□ -2.17
HTTP42858 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.49□□□□□ -2.17
HTTP42858 AC139103.1-201ENST00000534696 1030 ntBASIC1.49□□□□□ -2.17
HTTP42858 SNORA26.7-201ENST00000391288 122 ntBASIC1.48□□□□□ -2.17
HTTP42858 RNU2-25P-201ENST00000411041 191 ntBASIC1.48□□□□□ -2.17
HTTP42858 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.48□□□□□ -2.17
HTTP42858 AC018690.1-201ENST00000608144 626 ntBASIC1.48□□□□□ -2.17
HTTP42858 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
HTTP42858 PABPC1P9-201ENST00000426076 1612 ntBASIC1.48□□□□□ -2.17
HTTP42858 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
HTTP42858 U3.40-201ENST00000408706 208 ntBASIC1.48□□□□□ -2.17
HTTP42858 RPS12P24-201ENST00000412619 387 ntBASIC1.48□□□□□ -2.17
HTTP42858 AL078601.1-201ENST00000444542 271 ntBASIC1.48□□□□□ -2.17
HTTP42858 BMI1P1-201ENST00000445879 941 ntBASIC1.48□□□□□ -2.17
HTTP42858 AC005297.2-201ENST00000450430 606 ntBASIC1.48□□□□□ -2.17
HTTP42858 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.48□□□□□ -2.17
HTTP42858 AC105313.1-201ENST00000509121 353 ntBASIC1.48□□□□□ -2.17
HTTP42858 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.48□□□□□ -2.17
HTTP42858 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.48□□□□□ -2.17
HTTP42858 AP003033.1-201ENST00000527244 415 ntBASIC1.48□□□□□ -2.17
HTTP42858 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.48□□□□□ -2.17
HTTP42858 AP001029.3-201ENST00000588063 596 ntBASIC1.48□□□□□ -2.17
HTTP42858 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.48□□□□□ -2.17
HTTP42858 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.48□□□□□ -2.17
HTTP42858 AC138649.5-201ENST00000637456 137 ntBASIC1.48□□□□□ -2.17
HTTP42858 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.47□□□□□ -2.17
HTTP42858 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HTTP42858 TPRKBP1-201ENST00000456243 481 ntBASIC1.47□□□□□ -2.17
HTTP42858 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.47□□□□□ -2.17
HTTP42858 AC011472.4-201ENST00000615848 491 ntBASIC1.47□□□□□ -2.17
HTTP42858 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HTTP42858 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.47□□□□□ -2.17
HTTP42858 AC092902.1-201ENST00000486999 259 ntBASIC1.47□□□□□ -2.17
HTTP42858 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.47□□□□□ -2.17
HTTP42858 SEPT7P9-203ENST00000604116 343 ntBASIC1.47□□□□□ -2.17
HTTP42858 AC090970.3-201ENST00000612566 866 ntBASIC1.47□□□□□ -2.17
HTTP42858 AL449363.1-201ENST00000617815 186 ntBASIC1.47□□□□□ -2.17
HTTP42858 RNU6-984P-201ENST00000363236 109 ntBASIC1.46□□□□□ -2.17
HTTP42858 AC092638.1-201ENST00000411966 1275 ntBASIC1.46□□□□□ -2.17
HTTP42858 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.46□□□□□ -2.17
HTTP42858 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.46□□□□□ -2.17
HTTP42858 AP005435.4-201ENST00000529514 284 ntBASIC1.46□□□□□ -2.17
HTTP42858 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.46□□□□□ -2.17
HTTP42858 AL450326.2-201ENST00000421913 1962 ntBASIC1.46□□□□□ -2.18
HTTP42858 HMGB1P5-201ENST00000255320 642 ntBASIC1.46□□□□□ -2.18
HTTP42858 AL512430.2-201ENST00000406786 339 ntBASIC1.46□□□□□ -2.18
HTTP42858 MTND1P23-201ENST00000416931 372 ntBASIC1.46□□□□□ -2.18
HTTP42858 AC108059.3-201ENST00000456388 214 ntBASIC1.46□□□□□ -2.18
HTTP42858 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HTTP42858 RNA5SP121-201ENST00000516537 101 ntBASIC1.46□□□□□ -2.18
HTTP42858 RNA5SP384-201ENST00000516615 116 ntBASIC1.46□□□□□ -2.18
HTTP42858 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HTTP42858 U8.1-201ENST00000362843 134 ntBASIC1.46□□□□□ -2.18
HTTP42858 RNU6-115P-201ENST00000364310 107 ntBASIC1.46□□□□□ -2.18
HTTP42858 MIR193B-201ENST00000384907 83 ntBASIC1.46□□□□□ -2.18
HTTP42858 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.46□□□□□ -2.18
HTTP42858 VN1R108P-201ENST00000431580 830 ntBASIC1.46□□□□□ -2.18
HTTP42858 HSPE1P3-201ENST00000559254 309 ntBASIC1.46□□□□□ -2.18
HTTP42858 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.46□□□□□ -2.18
HTTP42858 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.45□□□□□ -2.18
HTTP42858 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.45□□□□□ -2.18
HTTP42858 DUXAP9-208ENST00000622815 614 ntBASIC1.45□□□□□ -2.18
HTTP42858 METTL21EP-201ENST00000298105 713 ntBASIC1.45□□□□□ -2.18
HTTP42858 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HTTP42858 DUXAP5-201ENST00000529668 529 ntBASIC1.45□□□□□ -2.18
HTTP42858 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.45□□□□□ -2.18
HTTP42858 AC099778.2-201ENST00000610904 211 ntBASIC1.45□□□□□ -2.18
HTTP42858 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HTTP42858 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HTTP42858 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.44□□□□□ -2.18
HTTP42858 RNU6-492P-201ENST00000363035 104 ntBASIC1.44□□□□□ -2.18
HTTP42858 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.44□□□□□ -2.18
HTTP42858 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
HTTP42858 SUB1P4-201ENST00000566062 339 ntBASIC1.44□□□□□ -2.18
HTTP42858 AC105245.1-201ENST00000581934 244 ntBASIC1.44□□□□□ -2.18
HTTP42858 VN1R79P-201ENST00000593540 513 ntBASIC1.44□□□□□ -2.18
HTTP42858 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.44□□□□□ -2.18
HTTP42858 MIR6086-201ENST00000638065 55 ntBASIC1.44□□□□□ -2.18
HTTP42858 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HTTP42858 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.44□□□□□ -2.18
HTTP42858 Y_RNA.258-201ENST00000364613 105 ntBASIC1.44□□□□□ -2.18
HTTP42858 RNU4-91P-201ENST00000364778 135 ntBASIC1.44□□□□□ -2.18
HTTP42858 Y_RNA.471-201ENST00000384312 102 ntBASIC1.44□□□□□ -2.18
HTTP42858 CYCSP48-201ENST00000417124 323 ntBASIC1.44□□□□□ -2.18
HTTP42858 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.44□□□□□ -2.18
HTTP42858 MTCYBP19-201ENST00000517463 1124 ntBASIC1.44□□□□□ -2.18
HTTP42858 AC034268.2-201ENST00000571784 482 ntBASIC1.44□□□□□ -2.18
HTTP42858 CBX3P2-202ENST00000583365 535 ntBASIC1.44□□□□□ -2.18
HTTP42858 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.44□□□□□ -2.18
HTTP42858 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HTTP42858 AC011477.1-204ENST00000623416 1325 ntBASIC1.44□□□□□ -2.18
HTTP42858 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.44□□□□□ -2.18
HTTP42858 Y_RNA.274-201ENST00000364714 101 ntBASIC1.44□□□□□ -2.18
HTTP42858 Y_RNA.303-201ENST00000364998 94 ntBASIC1.44□□□□□ -2.18
HTTP42858 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HTTP42858 MIR216A-201ENST00000385063 110 ntBASIC1.44□□□□□ -2.18
HTTP42858 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.44□□□□□ -2.18
HTTP42858 MTND5P7-201ENST00000413558 1798 ntBASIC1.44□□□□□ -2.18
HTTP42858 AC111188.2-201ENST00000529697 1387 ntBASIC1.43□□□□□ -2.18
HTTP42858 RNU1-133P-201ENST00000364867 167 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms