Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.67□□□□□ -1.82
HOXA13P31271 RPL23AP31-201ENST00000456160 467 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 CEACAMP4-201ENST00000457676 421 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AL024509.2-201ENST00000493462 493 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA13P31271 AF131216.2-201ENST00000512316 564 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA13P31271 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA13P31271 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA13P31271 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA13P31271 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA13P31271 AC105129.3-201ENST00000605455 485 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AL158211.4-201ENST00000606988 584 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AC006023.2-201ENST00000609916 167 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AC138932.5-201ENST00000617759 563 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 AC002550.2-201ENST00000621246 394 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA13P31271 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA13P31271 AC006927.3-201ENST00000638789 384 ntBASIC3.67□□□□□ -1.82
HOXA13P31271 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA13P31271 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA13P31271 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HOXA13P31271 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA13P31271 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HOXA13P31271 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA13P31271 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA13P31271 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA13P31271 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HOXA13P31271 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA13P31271 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXA13P31271 AL445523.1-201ENST00000451184 1362 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AL353743.1-202ENST00000431724 1695 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA13P31271 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA13P31271 Y_RNA.548-201ENST00000384656 105 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 TPMTP3-201ENST00000411928 735 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 NPM1P11-201ENST00000417106 855 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 SEPT2P1-201ENST00000419651 180 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA13P31271 BX890604.2-201ENST00000427883 474 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 RPL23AP69-201ENST00000431134 458 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 RSU1P2-202ENST00000437884 485 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 FAM103A2P-201ENST00000444122 354 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AP000936.2-201ENST00000447151 681 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA13P31271 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXA13P31271 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 VN1R17P-201ENST00000472048 1090 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 SETP11-201ENST00000473027 690 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AC021205.2-201ENST00000480069 347 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 DSTNP2-201ENST00000504533 515 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 MTCO2P32-201ENST00000514865 403 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA13P31271 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXA13P31271 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA13P31271 AC092851.1-201ENST00000535964 478 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 AC004024.1-201ENST00000549244 247 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA13P31271 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA13P31271 WISP1-OT1-201ENST00000602893 642 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AL360181.4-201ENST00000621752 134 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AC095031.1-201ENST00000623685 672 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AC018692.3-201ENST00000623929 123 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AC079597.1-201ENST00000624306 508 ntBASIC3.66□□□□□ -1.82
HOXA13P31271 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA13P31271 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA13P31271 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
HOXA13P31271 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA13P31271 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA13P31271 AC092125.1-201ENST00000562568 1995 ntBASIC3.65□□□□□ -1.82
HOXA13P31271 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.65□□□□□ -1.82
HOXA13P31271 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HOXA13P31271 SNORA48.5-201ENST00000391143 135 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 MTCYBP36-201ENST00000404146 440 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 RNU2-43P-201ENST00000410306 190 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 RPL7P8-201ENST00000411964 730 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC007899.1-201ENST00000412776 775 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AMD1P2-201ENST00000412936 992 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXA13P31271 DUTP6-201ENST00000425573 462 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXA13P31271 CST9LP2-201ENST00000437612 320 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 HMGB3P11-201ENST00000440127 604 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 RPL7P36-201ENST00000444633 681 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 MTND1P29-201ENST00000448112 647 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 KATNBL1P6-201ENST00000453433 915 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms