Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MTND1P21-201ENST00000412991 285 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC245291.1-201ENST00000419501 328 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC106872.3-201ENST00000495104 446 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC110794.1-201ENST00000505816 425 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC026427.2-201ENST00000506228 536 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC022447.3-201ENST00000506865 495 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 POU5F1P7-201ENST00000508759 541 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC112673.1-201ENST00000513168 575 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 MTND5P4-201ENST00000514978 288 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFRAP16234 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC006539.2-201ENST00000601729 572 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC004067.1-201ENST00000608733 700 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC009268.2-201ENST00000621925 457 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 PCMTD1P7-201ENST00000634506 357 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 MIR4275-201ENST00000636486 87 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.35□□□□□ -1.87
PDGFRAP16234 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFRAP16234 RNU5E-8P-201ENST00000363502 116 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 SNORD56.3-201ENST00000363507 71 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 RNU6-637P-201ENST00000384050 107 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 U3.20-201ENST00000390909 217 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 MIR1290-201ENST00000408735 78 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 AC010099.3-201ENST00000423896 409 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFRAP16234 BX890604.2-201ENST00000427883 474 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 RPL23AP83-201ENST00000434984 473 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 UBE2FP3-201ENST00000436366 524 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC006028.1-201ENST00000438379 402 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.35□□□□□ -1.87
PDGFRAP16234 MTCYBP3-201ENST00000445588 1137 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AL359385.1-201ENST00000456509 365 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 SNORA3.4-201ENST00000515969 96 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 AC087276.1-201ENST00000529659 480 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC068587.4-201ENST00000533893 186 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.35□□□□□ -1.87
PDGFRAP16234 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFRAP16234 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.35□□□□□ -1.87
PDGFRAP16234 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFRAP16234 AC097468.3-201ENST00000607956 456 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC004832.5-201ENST00000608677 401 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC008443.7-201ENST00000622195 246 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PDGFRAP16234 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFRAP16234 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFRAP16234 AC009902.3-201ENST00000606235 2172 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 AC008568.2-201ENST00000623862 2313 ntBASIC3.35□□□□□ -1.87
PDGFRAP16234 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDGFRAP16234 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 RNU6-853P-201ENST00000364306 107 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFRAP16234 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFRAP16234 AL008629.1-201ENST00000438615 184 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFRAP16234 ELOCP23-201ENST00000452014 332 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 RNA5SP310-201ENST00000459084 116 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 HSPE1P6-201ENST00000479457 291 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 RN7SL504P-201ENST00000494496 287 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.34□□□□□ -1.87
PDGFRAP16234 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFRAP16234 RNA5SP217-201ENST00000515959 91 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms