Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.33□□□□□ -2.04
TOP2AP11388 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.33□□□□□ -2.04
TOP2AP11388 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.33□□□□□ -2.04
TOP2AP11388 AC068338.1-201ENST00000565567 176 ntBASIC2.33□□□□□ -2.04
TOP2AP11388 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.33□□□□□ -2.04
TOP2AP11388 RNU4-51P-201ENST00000364206 140 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 RNA5SP363-201ENST00000365072 115 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 RNU1-101P-201ENST00000391171 127 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.32□□□□□ -2.04
TOP2AP11388 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
TOP2AP11388 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.32□□□□□ -2.04
TOP2AP11388 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TOP2AP11388 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TOP2AP11388 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.32□□□□□ -2.04
TOP2AP11388 RNU6-1080P-201ENST00000383982 107 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 BX682237.1-201ENST00000415016 335 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 AC099336.2-201ENST00000422457 254 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 AL358075.3-201ENST00000426289 226 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 UBE2V1P13-201ENST00000436983 439 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 HMGN2P18-201ENST00000450680 270 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 CALM1P2-201ENST00000452941 448 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 RNA5SP61-201ENST00000516453 100 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 AP003033.1-201ENST00000527244 415 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.32□□□□□ -2.04
TOP2AP11388 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.32□□□□□ -2.04
TOP2AP11388 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.32□□□□□ -2.04
TOP2AP11388 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 AC116618.1-201ENST00000634617 774 ntBASIC2.32□□□□□ -2.04
TOP2AP11388 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.32□□□□□ -2.04
TOP2AP11388 OR4G11P-202ENST00000642116 1414 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.31□□□□□ -2.04
TOP2AP11388 RNU6-582P-201ENST00000362989 107 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 RPL21P1-201ENST00000399532 476 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 HSPE1P1-201ENST00000421494 318 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.31□□□□□ -2.04
TOP2AP11388 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 CALM1P1-201ENST00000442082 433 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 ATP5EP1-201ENST00000510257 156 ntBASIC2.31□□□□□ -2.04
TOP2AP11388 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.31□□□□□ -2.04
TOP2AP11388 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.31□□□□□ -2.04
TOP2AP11388 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.31□□□□□ -2.04
TOP2AP11388 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TOP2AP11388 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.3□□□□□ -2.04
TOP2AP11388 SNORD56.5-201ENST00000364281 72 ntBASIC2.3□□□□□ -2.04
TOP2AP11388 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.3□□□□□ -2.04
TOP2AP11388 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.3□□□□□ -2.04
TOP2AP11388 SNRPGP13-201ENST00000442212 177 ntBASIC2.3□□□□□ -2.04
TOP2AP11388 AC090096.1-201ENST00000489168 390 ntBASIC2.3□□□□□ -2.04
TOP2AP11388 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.3□□□□□ -2.04
TOP2AP11388 MIR5194-201ENST00000582634 120 ntBASIC2.3□□□□□ -2.04
TOP2AP11388 AC136443.5-201ENST00000603741 370 ntBASIC2.3□□□□□ -2.04
TOP2AP11388 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.3□□□□□ -2.04
TOP2AP11388 AC116447.1-201ENST00000613153 453 ntBASIC2.3□□□□□ -2.04
TOP2AP11388 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.3□□□□□ -2.04
TOP2AP11388 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TOP2AP11388 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
TOP2AP11388 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.29□□□□□ -2.04
TOP2AP11388 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.29□□□□□ -2.04
TOP2AP11388 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.29□□□□□ -2.04
TOP2AP11388 AC055855.1-201ENST00000489563 579 ntBASIC2.29□□□□□ -2.04
TOP2AP11388 SEM1P1-201ENST00000506694 209 ntBASIC2.29□□□□□ -2.04
TOP2AP11388 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.29□□□□□ -2.04
TOP2AP11388 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.29□□□□□ -2.04
TOP2AP11388 MIR3199-1-201ENST00000582434 88 ntBASIC2.29□□□□□ -2.04
TOP2AP11388 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.29□□□□□ -2.04
TOP2AP11388 AP000648.3-201ENST00000623539 4507 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TOP2AP11388 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TOP2AP11388 Y_RNA.112-201ENST00000363250 102 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.28□□□□□ -2.04
TOP2AP11388 AC106901.1-201ENST00000425086 698 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.28□□□□□ -2.04
TOP2AP11388 COX6CP14-201ENST00000469580 174 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 AC006499.2-201ENST00000513470 337 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 ANP32BP3-201ENST00000559213 706 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 CBX3P2-202ENST00000583365 535 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 AC010928.2-201ENST00000588017 287 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.28□□□□□ -2.04
TOP2AP11388 LINC00216-201ENST00000623548 1126 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 AL356118.1-201ENST00000635272 1078 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 AL157700.1-201ENST00000561973 1432 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 AC093536.2-201ENST00000565257 1406 ntBASIC2.28□□□□□ -2.04
TOP2AP11388 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TOP2AP11388 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.27□□□□□ -2.05
TOP2AP11388 RN7SKP49-201ENST00000516675 260 ntBASIC2.27□□□□□ -2.05
TOP2AP11388 HSPE1P3-201ENST00000559254 309 ntBASIC2.27□□□□□ -2.05
TOP2AP11388 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
TOP2AP11388 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
TOP2AP11388 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TOP2AP11388 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
TOP2AP11388 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TOP2AP11388 AC008526.1-201ENST00000509149 338 ntBASIC2.27□□□□□ -2.05
TOP2AP11388 AC006249.1-201ENST00000621223 471 ntBASIC2.27□□□□□ -2.05
TOP2AP11388 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.27□□□□□ -2.05
TOP2AP11388 Z96811.1-201ENST00000445880 108 ntBASIC2.26□□□□□ -2.05
TOP2AP11388 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.26□□□□□ -2.05
TOP2AP11388 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.26□□□□□ -2.05
TOP2AP11388 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.26□□□□□ -2.05
TOP2AP11388 AC006023.2-201ENST00000609916 167 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms