Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORA14A-201ENST00000364773 135 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 CD24P4-201ENST00000382840 243 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 RNU6-185P-201ENST00000384421 107 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 MIR1250-201ENST00000408098 113 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.13□□□□□ -2.07
COL1A1P02452 MTATP6P4-201ENST00000427725 675 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.13□□□□□ -2.07
COL1A1P02452 AL451074.3-201ENST00000437709 472 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.13□□□□□ -2.07
COL1A1P02452 XKRYP6-201ENST00000440468 1116 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 XKRYP3-201ENST00000442113 1116 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.13□□□□□ -2.07
COL1A1P02452 AC087879.1-201ENST00000474343 374 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL1A1P02452 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.13□□□□□ -2.07
COL1A1P02452 HSPE1P20-201ENST00000538133 289 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 CBX3P4-201ENST00000538909 354 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 MIR4303-201ENST00000581299 66 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.13□□□□□ -2.07
COL1A1P02452 AC091057.2-201ENST00000602594 792 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 DUXAP4-201ENST00000603046 613 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL1A1P02452 AP000676.4-201ENST00000624659 623 ntBASIC2.13□□□□□ -2.07
COL1A1P02452 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.13□□□□□ -2.07
COL1A1P02452 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.13□□□□□ -2.07
COL1A1P02452 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL1A1P02452 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL1A1P02452 AL121972.1-201ENST00000402023 252 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 HMGB1P27-201ENST00000431429 603 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 RPL23AP58-201ENST00000440453 469 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 XKRY2-201ENST00000442362 1093 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 RPS29P12-201ENST00000460178 152 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 RPL21P39-201ENST00000463605 483 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 AC104629.2-201ENST00000468627 598 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 AC011979.1-201ENST00000472300 483 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 RPL21P93-201ENST00000480465 489 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 AC233702.1-201ENST00000482905 502 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 AC093591.1-201ENST00000491435 481 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.12□□□□□ -2.07
COL1A1P02452 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.12□□□□□ -2.07
COL1A1P02452 RMST_2.1-201ENST00000617263 136 ntBASIC2.12□□□□□ -2.07
COL1A1P02452 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.12□□□□□ -2.07
COL1A1P02452 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL1A1P02452 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.11□□□□□ -2.07
COL1A1P02452 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 RNU6-707P-201ENST00000364647 95 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 MIR613-201ENST00000385248 95 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL1A1P02452 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.11□□□□□ -2.07
COL1A1P02452 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.11□□□□□ -2.07
COL1A1P02452 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.11□□□□□ -2.07
COL1A1P02452 Z77249.1-201ENST00000444622 1175 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 RPS24P6-201ENST00000452670 400 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.11□□□□□ -2.07
COL1A1P02452 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.11□□□□□ -2.07
COL1A1P02452 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.11□□□□□ -2.07
COL1A1P02452 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.11□□□□□ -2.07
COL1A1P02452 AC117532.1-201ENST00000514638 323 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 AP004371.1-201ENST00000525240 214 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 AC007375.1-201ENST00000554513 578 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 MIR502-201ENST00000606349 86 ntBASIC2.11□□□□□ -2.07
COL1A1P02452 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.11□□□□□ -2.07
COL1A1P02452 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL1A1P02452 SSXP9-201ENST00000417503 292 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 MTCYBP24-201ENST00000420387 1106 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AC233728.2-201ENST00000425348 757 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AL645568.3-201ENST00000433683 316 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 Z96811.1-201ENST00000445880 108 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 HMGB1P26-201ENST00000452520 628 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 SYPL1P1-201ENST00000473622 768 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AC021146.7-201ENST00000509604 775 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A1P02452 SETP2-201ENST00000553886 926 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A1P02452 AL049838.1-201ENST00000563647 981 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.1□□□□□ -2.07
COL1A1P02452 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A1P02452 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A1P02452 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A1P02452 AL035411.2-201ENST00000604022 421 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 KATNBL1P1-201ENST00000605192 748 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AC104307.1-201ENST00000616142 196 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 AL589994.2-201ENST00000621124 579 ntBASIC2.1□□□□□ -2.07
COL1A1P02452 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
COL1A1P02452 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.07
COL1A1P02452 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
COL1A1P02452 HSPE1P11-201ENST00000339579 310 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 RNU6-799P-201ENST00000363567 107 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 RNU6-1027P-201ENST00000383998 107 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.09□□□□□ -2.07
COL1A1P02452 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.09□□□□□ -2.07
COL1A1P02452 OR51B8P-201ENST00000449892 769 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.09□□□□□ -2.07
COL1A1P02452 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.09□□□□□ -2.07
COL1A1P02452 snoU13.7-201ENST00000459220 104 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 RPS23P3-201ENST00000470993 430 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 HMGB1P22-201ENST00000505315 124 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 FAM60CP-201ENST00000591086 664 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 ZNF92P3-201ENST00000596594 954 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms