Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC068305.1-201ENST00000497406 726 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX2-2O95096 RNA5SP337-201ENST00000517007 109 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.43□□□□□ -1.86
NKX2-2O95096 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC008011.1-201ENST00000545989 227 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX2-2O95096 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC099489.2-201ENST00000574976 260 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC087683.1-201ENST00000591187 441 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 KLKP1-201ENST00000595979 403 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC006566.1-201ENST00000608943 513 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AC103710.2-201ENST00000609912 942 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AL589743.7-201ENST00000612637 233 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-2O95096 AP000553.6-201ENST00000641242 118 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-2O95096 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-2O95096 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX2-2O95096 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-2O95096 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-2O95096 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-2O95096 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NKX2-2O95096 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NKX2-2O95096 RNA5SP502-201ENST00000362694 119 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-2O95096 OR5H15-201ENST00000383696 930 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 RNU1-39P-201ENST00000383897 165 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 SNORD116-4-201ENST00000384733 96 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC018630.2-202ENST00000422992 927 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 NDUFB4P7-201ENST00000423198 363 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 RPL7P2-201ENST00000427639 268 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC119618.1-201ENST00000434191 222 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC140076.1-201ENST00000449897 361 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC010631.1-201ENST00000474150 156 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 RPS27AP1-201ENST00000475545 471 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC106872.2-201ENST00000494303 480 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 GMPSP1-201ENST00000514075 579 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 RNU1-61P-201ENST00000516107 151 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 SCARNA15.2-201ENST00000516409 127 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 RNU6-840P-201ENST00000517275 65 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.42□□□□□ -1.86
NKX2-2O95096 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-2O95096 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC005951.2-201ENST00000576282 495 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AP000860.1-201ENST00000605250 559 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC103591.3-201ENST00000608684 209 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AP000254.1-201ENST00000609934 520 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC012531.5-201ENST00000611375 151 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-2O95096 HULC.1-201ENST00000612720 240 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 SDR42E1P2-201ENST00000614861 481 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC010133.1-201ENST00000615809 842 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC006338.1-201ENST00000618453 749 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC110994.2-201ENST00000635481 492 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
NKX2-2O95096 AC118273.1-201ENST00000525324 3006 ntBASIC3.42□□□□□ -1.86
NKX2-2O95096 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-2O95096 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-2O95096 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-2O95096 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NKX2-2O95096 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NKX2-2O95096 U3.11-201ENST00000364476 212 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 MIR3074-201ENST00000384885 81 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 SNORA57.1-201ENST00000391227 145 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 U3.42-201ENST00000408746 214 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 RNU2-16P-201ENST00000410712 136 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 HMGB3P23-201ENST00000414981 585 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms