Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SOD2P1-201ENST00000396543 562 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 SDHCP2-201ENST00000398565 501 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 RNU6ATAC-201ENST00000408749 126 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.74□□□□□ -1.65
RFXAPO00287 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.74□□□□□ -1.65
RFXAPO00287 AL031663.1-201ENST00000437445 219 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 CBX1P4-201ENST00000439415 457 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 snoU13.24-201ENST00000458998 104 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.74□□□□□ -1.65
RFXAPO00287 AC055855.1-201ENST00000489563 579 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.74□□□□□ -1.65
RFXAPO00287 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFXAPO00287 RPS27P27-201ENST00000498779 255 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 Y_RNA.661-201ENST00000516003 99 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 Y_RNA.680-201ENST00000516441 93 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.74□□□□□ -1.65
RFXAPO00287 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.74□□□□□ -1.65
RFXAPO00287 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.74□□□□□ -1.65
RFXAPO00287 AP000763.2-201ENST00000540641 163 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.74□□□□□ -1.65
RFXAPO00287 MTCO3P23-201ENST00000561363 289 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC105224.1-201ENST00000587055 421 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC016727.2-201ENST00000603988 621 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC104695.3-201ENST00000604052 296 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AL592436.1-201ENST00000605135 558 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 AC012409.4-201ENST00000612923 249 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 uc_338.9-201ENST00000617424 182 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
RFXAPO00287 AL031119.1-201ENST00000404707 1879 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.74□□□□□ -1.65
RFXAPO00287 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFXAPO00287 AL121950.1-201ENST00000624993 2077 ntBASIC4.74□□□□□ -1.65
RFXAPO00287 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFXAPO00287 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFXAPO00287 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFXAPO00287 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFXAPO00287 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.73□□□□□ -1.65
RFXAPO00287 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
RFXAPO00287 AL157777.2-201ENST00000258070 137 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 Y_RNA.396-201ENST00000383949 103 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 Y_RNA.473-201ENST00000384333 102 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 RNU6-601P-201ENST00000384540 107 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 MIR454-201ENST00000390180 115 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 RNU6-954P-201ENST00000411355 107 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 AC080125.1-201ENST00000414888 684 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 DPH3P2-201ENST00000422618 250 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 AC096632.1-201ENST00000427395 310 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.73□□□□□ -1.65
RFXAPO00287 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 RPS26P40-201ENST00000435209 294 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 AC104563.1-201ENST00000476147 376 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 RPS27AP13-201ENST00000498403 237 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 MRPS35P2-201ENST00000508242 191 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 AC108471.1-201ENST00000513977 287 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 SNORA25.10-201ENST00000515926 124 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 RNU6-1143P-201ENST00000516125 104 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 RNA5SP49-201ENST00000516450 115 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 OR4P1P-201ENST00000530808 1136 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 AP000857.1-201ENST00000532151 543 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 AC040958.1-201ENST00000561102 201 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 AC104662.1-201ENST00000604448 511 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.73□□□□□ -1.65
RFXAPO00287 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RFXAPO00287 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFXAPO00287 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RFXAPO00287 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.73□□□□□ -1.65
RFXAPO00287 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.73□□□□□ -1.65
RFXAPO00287 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.72□□□□□ -1.65
RFXAPO00287 AC032011.1-201ENST00000611703 1549 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.72□□□□□ -1.65
RFXAPO00287 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
RFXAPO00287 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 AP001642.1-201ENST00000624727 2117 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 RNU6-1029P-201ENST00000384109 107 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 Y_RNA.455-201ENST00000384230 98 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AL139397.2-201ENST00000404529 772 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms