Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AL050341.1-201ENST00000447743 313 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 EEF1B2P7-201ENST00000451177 676 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC233279.1-201ENST00000455300 423 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC133134.1-201ENST00000466800 359 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 LINC00888-204ENST00000487386 421 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC135721.1-201ENST00000497954 479 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC084024.2-201ENST00000503480 791 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 XKRY-201ENST00000510392 1100 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC017037.2-201ENST00000513850 890 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 SNORA31.11-201ENST00000516528 139 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC109329.2-201ENST00000519658 482 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC026616.1-201ENST00000523157 525 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AMZ2P1-203ENST00000565833 850 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 MIR3921-201ENST00000577308 85 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 DNAJC19P3-201ENST00000594491 331 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AL022099.1-201ENST00000604551 712 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC002487.1-201ENST00000604565 994 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC007938.3-201ENST00000604965 623 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC103810.6-201ENST00000606708 136 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 MIR6073-201ENST00000352083 89 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RNU4-82P-201ENST00000362443 140 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-1155P-201ENST00000363554 107 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-353P-201ENST00000364266 108 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-1072P-201ENST00000384703 107 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-443P-201ENST00000384780 107 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC016769.3-201ENST00000396562 315 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RNA5SP80-201ENST00000410475 111 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AL133384.1-201ENST00000412744 351 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AL136133.1-201ENST00000413694 376 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC009963.1-201ENST00000417265 157 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AL358075.3-201ENST00000426289 226 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC090774.1-201ENST00000435925 246 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC234064.1-201ENST00000436312 247 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 GXYLT1P1-201ENST00000446657 490 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC011753.1-201ENST00000451001 220 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 MTND2P30-201ENST00000456663 382 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 snoU13.28-201ENST00000459235 104 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 MRPL42P6-201ENST00000486397 371 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC010486.1-201ENST00000511793 424 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 GLYCAM1-201ENST00000546596 285 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 MIR4435-1-201ENST00000582552 80 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AC100814.1-201ENST00000606963 623 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 AL590396.4-201ENST00000636779 956 ntBASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV41A0A0B4J266 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL137003.2-201ENST00000606924 2538 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 DEFB108F-201ENST00000344638 222 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-657P-201ENST00000383904 107 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 SNORD51-201ENST00000384320 80 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 MIR767-201ENST00000390228 109 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 MIR1290-201ENST00000408735 78 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RN7SKP140-201ENST00000411196 284 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-575P-201ENST00000411326 105 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC092573.2-201ENST00000434546 243 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL714022.1-201ENST00000439897 151 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC009296.1-201ENST00000443146 155 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 HIGD1AP2-201ENST00000446367 280 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RPL7P55-201ENST00000450522 746 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms