Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC091834.1-201ENST00000614543 472 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC116165.2-201ENST00000616705 206 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC048347.1-201ENST00000624621 427 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 U6.98-201ENST00000637157 84 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC099654.12-201ENST00000639868 649 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC005832.2-201ENST00000538921 1430 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AL359893.1-201ENST00000447628 1580 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 Y_RNA.6-201ENST00000362350 114 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 Y_RNA.126-201ENST00000363382 111 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-878P-201ENST00000384578 110 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 FCF1P9-201ENST00000412546 282 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 RPL31P2-201ENST00000413849 377 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 SDCBPP1-201ENST00000440192 890 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 HMGB1P15-201ENST00000453854 435 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 snoU109.1-201ENST00000459339 135 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC104563.1-201ENST00000476147 376 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC112204.1-201ENST00000502591 103 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 HIGD1AP3-201ENST00000515857 278 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 SNORA18.6-201ENST00000516792 115 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 RPL21P5-201ENST00000554662 472 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AL009028.1-201ENST00000604895 802 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC090578.1-201ENST00000604955 591 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC092794.1-201ENST00000612734 582 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AP001506.1-201ENST00000615444 211 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC108479.2-201ENST00000617314 601 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC095031.1-201ENST00000623685 672 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC099654.13-201ENST00000639774 207 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 AC097714.1-201ENST00000511272 1647 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 NUP58P1-201ENST00000502546 1738 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 MTND5P26-201ENST00000426018 1752 ntBASIC3.61□□□□□ -1.83
SMARCAL1Q9NZC9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 SNORD56.3-201ENST00000363507 71 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 MTND4LP20-201ENST00000402379 270 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL356421.1-201ENST00000403255 413 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 RNA5SP107-201ENST00000411358 122 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 BX890604.2-201ENST00000427883 474 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 RPL22P17-201ENST00000438729 315 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-1003P-201ENST00000517099 105 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 RNU1-45P-201ENST00000517191 141 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AP003122.4-201ENST00000530980 758 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC087883.1-201ENST00000551882 391 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL157394.1-201ENST00000562983 1224 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL353997.4-201ENST00000586196 166 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC010928.3-201ENST00000587712 541 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms