Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AC136624.4-201ENST00000573044 370 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 ZNF415P1-201ENST00000582279 1166 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 CKS1BP3-201ENST00000600888 237 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AC064872.1-201ENST00000604823 1072 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 BX664608.1-201ENST00000610519 487 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AP001506.1-201ENST00000615444 211 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AC092140.2-201ENST00000618027 521 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AL603839.4-201ENST00000624658 1005 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 AC110994.2-201ENST00000635481 492 ntBASIC3.6□□□□□ -1.83
BRF2Q9HAW0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRF2Q9HAW0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 RNY4P16-201ENST00000364768 94 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 U3.42-201ENST00000408746 214 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 RSL24D1P6-201ENST00000426934 401 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 USP12PX-201ENST00000432383 1057 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 HMGN2P20-201ENST00000437531 273 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 SNORD42A-201ENST00000459584 64 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 LARP1BP2-201ENST00000486594 519 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 RN7SL323P-201ENST00000494712 295 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 ARL2BPP4-201ENST00000506854 471 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 Y_RNA.672-201ENST00000516289 104 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC022695.1-201ENST00000522089 237 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AP003181.2-201ENST00000528941 181 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AL606834.2-201ENST00000602954 668 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AL139286.2-201ENST00000606838 396 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC108747.1-201ENST00000609508 535 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC245517.5-201ENST00000611529 162 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC138932.5-201ENST00000617759 563 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.59□□□□□ -1.83
BRF2Q9HAW0 RNA5SP196-201ENST00000625967 102 ntBASIC3.59□□□□□ -1.83
BRF2Q9HAW0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
BRF2Q9HAW0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF2Q9HAW0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF2Q9HAW0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF2Q9HAW0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF2Q9HAW0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 GNG5P1-201ENST00000255500 204 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 RNY3P13-201ENST00000365542 102 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AL590704.1-201ENST00000402856 794 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 RPL21P24-201ENST00000413752 448 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 HMGB3P23-201ENST00000414981 585 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 MORF4L1P6-201ENST00000418771 268 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC073614.1-201ENST00000438690 650 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 USP9YP15-201ENST00000442391 422 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 SSXP4-201ENST00000451349 245 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AL049874.1-201ENST00000489560 388 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC114797.1-201ENST00000514003 728 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 SCARNA14-201ENST00000516903 136 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 IGKV2-23-201ENST00000518729 323 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC022690.1-201ENST00000526681 550 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC124947.2-202ENST00000552735 133 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC099489.2-201ENST00000574976 260 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 HMGN1P30-201ENST00000589286 268 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 KLKP1-201ENST00000595979 403 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms