Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC123786.2-201ENST00000603459 275 ntBASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 AL357075.2-201ENST00000614906 189 ntBASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 AC118658.2-201ENST00000618697 459 ntBASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 AC068700.1-201ENST00000565862 3754 ntBASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCAF1Q9H7N4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 Y_RNA.33-201ENST00000362591 102 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 Y_RNA.219-201ENST00000364232 113 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AC068538.1-201ENST00000376856 336 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AL391361.1-201ENST00000405580 489 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 RPL36AP39-201ENST00000445859 318 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 RPL23AP28-201ENST00000448062 470 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 RPS27P1-201ENST00000450552 247 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 GM2AP2-201ENST00000491764 562 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AC104164.2-201ENST00000496953 495 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 SNORA70.11-201ENST00000515987 138 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 SNORA70.13-201ENST00000516116 138 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AP005431.1-201ENST00000618479 319 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 MIR7854-201ENST00000620068 65 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AL136164.4-201ENST00000625013 2135 ntBASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.44□□□□□ -0.9
SCAF1Q9H7N4 AC129502.1-201ENST00000623261 1654 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 Y_RNA.24-201ENST00000362508 103 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 SNORA8.3-201ENST00000384679 139 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 RNA5SP271-201ENST00000516700 88 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 AC087575.1-201ENST00000585087 229 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 AC092266.1-201ENST00000610958 165 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 AC007114.2-201ENST00000576014 4281 ntBASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCAF1Q9H7N4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 Y_RNA.293-201ENST00000364908 93 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 Y_RNA.393-201ENST00000383936 102 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 MIR585-201ENST00000384887 94 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AL121916.1-201ENST00000429405 308 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AC245047.8-201ENST00000456455 284 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AC098847.1-201ENST00000473094 348 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 RN7SL561P-201ENST00000488553 281 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 RNU6-155P-201ENST00000516347 100 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 EIF4A2P5-201ENST00000529914 499 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AC091133.5-201ENST00000603088 301 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 Z82209.1-201ENST00000422141 2135 ntBASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC9.42□□□□□ -0.9
SCAF1Q9H7N4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.41□□□□□ -0.9
SCAF1Q9H7N4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms