Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC072046.2-201ENST00000618366 268 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDT1Q9H211 OR5H6-203ENST00000642105 978 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.83□□□□□ -1.8
CDT1Q9H211 AC092447.10-201ENST00000620607 1652 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CDT1Q9H211 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDT1Q9H211 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.82□□□□□ -1.8
CDT1Q9H211 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.82□□□□□ -1.8
CDT1Q9H211 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDT1Q9H211 OR4G2P-201ENST00000328113 903 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 SNORD46.1-201ENST00000364139 104 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDT1Q9H211 RNU6-1207P-201ENST00000384343 107 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDT1Q9H211 SNORD17-201ENST00000390930 237 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 SNORA40.3-201ENST00000390964 122 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 RN7SKP56-201ENST00000410513 331 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 HMGN1P14-201ENST00000412459 517 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.82□□□□□ -1.8
CDT1Q9H211 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AP000907.1-201ENST00000428428 510 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 EZH2P1-201ENST00000431167 291 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AL671855.1-201ENST00000446875 1203 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC003071.1-201ENST00000451219 789 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AL353691.1-201ENST00000451332 387 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.82□□□□□ -1.8
CDT1Q9H211 Z82190.1-201ENST00000454534 490 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 snoU13.8-201ENST00000458890 104 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC008155.2-201ENST00000464337 397 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDT1Q9H211 RN7SL594P-201ENST00000470590 287 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 MTAPP1-201ENST00000489154 819 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC034222.1-201ENST00000494052 532 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AC116353.2-201ENST00000505332 712 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CDT1Q9H211 RNU6-506P-201ENST00000516553 94 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AP006245.1-201ENST00000522549 120 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AP002453.2-201ENST00000533503 320 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDT1Q9H211 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AC107954.1-201ENST00000565906 727 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC092325.1-201ENST00000566449 554 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC099489.2-201ENST00000574976 260 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC006270.2-201ENST00000578523 652 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AL355812.1-201ENST00000603215 216 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AC090517.2-201ENST00000614966 680 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.82□□□□□ -1.8
CDT1Q9H211 AL157786.1-207ENST00000627771 695 ntBASIC3.82□□□□□ -1.8
CDT1Q9H211 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDT1Q9H211 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CDT1Q9H211 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.81□□□□□ -1.8
CDT1Q9H211 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 RNA5SP258-201ENST00000362750 119 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 Y_RNA.303-201ENST00000364998 94 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 Y_RNA.333-201ENST00000365274 102 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 Y_RNA.548-201ENST00000384656 105 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 Y_RNA.598-201ENST00000410480 95 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.81□□□□□ -1.8
CDT1Q9H211 MTCYBP24-201ENST00000420387 1106 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AC006989.1-201ENST00000427212 131 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 MRPS18BP2-201ENST00000434310 759 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 UBE2V1P8-201ENST00000437166 265 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 HMGN2P21-201ENST00000447764 270 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.81□□□□□ -1.8
CDT1Q9H211 KLF3P2-201ENST00000465138 268 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 MTCO3P38-201ENST00000468910 766 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AL121769.1-201ENST00000469473 401 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC023598.1-201ENST00000472521 361 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC126182.1-201ENST00000478134 357 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 TMED11P-201ENST00000479478 690 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC004924.1-201ENST00000480160 781 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.81□□□□□ -1.8
CDT1Q9H211 RPL9P6-201ENST00000492764 598 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC109464.2-201ENST00000510242 943 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 RN7SKP298-201ENST00000515950 94 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms