Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL138880.2-201ENST00000616214 239 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC009090.3-201ENST00000616553 565 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 AL356118.1-201ENST00000635272 1078 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC110994.2-201ENST00000635481 492 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 BX649567.1-201ENST00000642071 1134 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM4Q9C037 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC090740.1-201ENST00000623193 2262 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM4Q9C037 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 Y_RNA.466-201ENST00000384294 113 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 MIR7-1-201ENST00000384871 110 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AL355497.1-201ENST00000406262 551 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 U3.40-201ENST00000408706 208 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 NANOGP5-201ENST00000424456 877 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 RPL7P37-201ENST00000425095 738 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC068135.1-201ENST00000446164 246 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC245517.4-201ENST00000448601 281 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 TRBV1-201ENST00000476502 284 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 OR4G11P-201ENST00000492842 939 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC022493.1-201ENST00000492984 337 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC112673.1-201ENST00000513168 575 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 RN7SKP24-201ENST00000515888 284 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AP003467.2-201ENST00000520175 319 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AP001317.1-201ENST00000531194 960 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 TRAV11-201ENST00000539512 339 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 APOOP1-201ENST00000604695 592 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM4Q9C037 AP000553.5-201ENST00000641933 54 ntBASIC2.34□□□□□ -2.03
TRIM4Q9C037 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM4Q9C037 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 AL161781.1-201ENST00000354277 403 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 RNU1-73P-201ENST00000383971 164 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 SNORA1.3-201ENST00000384676 136 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 Z86062.1-201ENST00000406773 777 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 UBE2V1P5-201ENST00000440070 405 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 RN7SKP210-201ENST00000459176 261 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 RPS15AP34-201ENST00000487776 387 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM4Q9C037 RNU6-1053P-201ENST00000515930 101 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 SCARNA17.1-201ENST00000516211 143 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 SCARNA17.2-201ENST00000516334 143 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 HMGB1P46-201ENST00000520062 610 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC025755.1-201ENST00000521306 278 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 OR10V3P-201ENST00000525712 725 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC084033.1-201ENST00000550830 633 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC126177.3-201ENST00000551839 688 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM4Q9C037 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM4Q9C037 MIR4448-201ENST00000584360 86 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 MIR4781-201ENST00000585250 76 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC018618.2-201ENST00000604770 446 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC242628.1-201ENST00000606810 391 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 SCARNA17.4-201ENST00000614296 143 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC090116.1-201ENST00000615679 446 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM4Q9C037 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
TRIM4Q9C037 AC244517.1-201ENST00000606030 2086 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 SNORA51.12-201ENST00000384448 134 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 AL121882.1-201ENST00000422893 417 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 MTCO2P17-201ENST00000424336 677 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AL009174.1-201ENST00000426577 416 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 SETP11-201ENST00000473027 690 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 TTC39CP1-201ENST00000512513 755 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 PRELID3BP4-201ENST00000515476 571 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 RNU6-889P-201ENST00000517189 103 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms