Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 SSXP4-201ENST00000451349 245 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL445669.2-201ENST00000454425 421 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC096751.1-202ENST00000502691 1067 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC087897.1-201ENST00000550134 156 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 EEF1B2P4-201ENST00000551398 348 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL391156.1-201ENST00000554965 554 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC068620.3-201ENST00000602749 560 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL445435.1-201ENST00000604232 665 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC055876.5-201ENST00000605667 259 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC091946.2-201ENST00000606105 291 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL355810.1-201ENST00000614629 552 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL512427.1-201ENST00000618593 349 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC006249.1-201ENST00000621223 471 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AL157770.1-201ENST00000623049 439 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC010297.1-201ENST00000623948 149 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC091925.2-201ENST00000625059 256 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 CYP3A51P-201ENST00000633513 256 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 SUGT1P1-201ENST00000379514 476 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AL035405.1-201ENST00000400795 710 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 RPS4XP7-201ENST00000406274 780 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 RNU4-65P-201ENST00000410473 140 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 HMGN2P35-201ENST00000412164 270 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 RPS7P9-201ENST00000414704 586 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC080125.1-201ENST00000414888 684 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 SSXP9-201ENST00000417503 292 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 snoU109.4-201ENST00000458953 143 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC008571.1-201ENST00000467232 300 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC026412.2-201ENST00000512270 1075 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AP000873.5-201ENST00000533906 236 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AC008127.2-201ENST00000549925 1075 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 TPMTP1-201ENST00000592307 737 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 CRYM-AS1-204ENST00000637983 556 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
RPAP1Q9BWH6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 RNA5SP289-201ENST00000362332 137 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 RAP1BP1-201ENST00000412709 553 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 USP9YP20-201ENST00000419224 558 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC099677.1-201ENST00000420575 175 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC003685.2-201ENST00000422795 395 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC079780.1-201ENST00000428259 207 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 MTND4LP10-201ENST00000435146 291 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 PTGES3P1-201ENST00000439531 483 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC093155.1-201ENST00000440164 826 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 MTND2P19-201ENST00000449129 1012 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 KLHL2P1-201ENST00000508691 521 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC018630.1-201ENST00000541376 925 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AC126365.2-201ENST00000580630 379 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AL110115.1-201ENST00000614396 364 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 U4.3-201ENST00000621047 82 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 AL360181.4-201ENST00000621752 134 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPAP1Q9BWH6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 SEPT7P5-201ENST00000434048 306 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 MTCYBP42-201ENST00000444653 1130 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC006390.1-201ENST00000508068 283 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 RN7SKP24-201ENST00000515888 284 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 SNORA31.8-201ENST00000516327 108 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 NDUFS5P6-201ENST00000529136 295 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms