Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC092747.4-201ENST00000620519 1861 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
LRCH3Q96II8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LRCH3Q96II8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 RNU6-898P-201ENST00000365627 104 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LRCH3Q96II8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LRCH3Q96II8 SNORA70.9-201ENST00000384370 135 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 SNORA48.7-201ENST00000391302 135 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 RN7SKP114-201ENST00000410327 279 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 RPS15AP40-201ENST00000419621 391 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 AL031736.2-201ENST00000426573 787 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 TBCAP1-201ENST00000436520 327 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC004129.2-201ENST00000457229 287 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 RNU6-1218P-201ENST00000458990 108 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.15□□□□□ -1.42
LRCH3Q96II8 AP005660.1-201ENST00000522972 293 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 RPL23AP78-201ENST00000599928 470 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 uc_338.26-201ENST00000612659 160 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 AC004852.3-201ENST00000614131 326 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 Y_RNA.778-201ENST00000620203 90 ntBASIC6.15□□□□□ -1.42
LRCH3Q96II8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.15□□□□□ -1.43
LRCH3Q96II8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LRCH3Q96II8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
LRCH3Q96II8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LRCH3Q96II8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
LRCH3Q96II8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.15□□□□□ -1.43
LRCH3Q96II8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
LRCH3Q96II8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LRCH3Q96II8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
LRCH3Q96II8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC007159.1-201ENST00000566529 4706 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 SNX18P3-202ENST00000565670 1750 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 RNU6-151P-201ENST00000364158 107 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 MIR23B-201ENST00000384832 97 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 RNA5SP91-201ENST00000390902 119 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 HMGN1P11-201ENST00000508668 303 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 Y_RNA.686-201ENST00000516548 134 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 SNORA27.4-201ENST00000516650 95 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 RNU6-914P-201ENST00000516749 109 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AP002001.1-203ENST00000534002 267 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AL034351.1-201ENST00000605288 668 ntBASIC6.14□□□□□ -1.43
LRCH3Q96II8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.14□□□□□ -1.43
LRCH3Q96II8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRCH3Q96II8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
LRCH3Q96II8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LRCH3Q96II8 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRCH3Q96II8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LRCH3Q96II8 AOX3P-204ENST00000491025 2107 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRCH3Q96II8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRCH3Q96II8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRCH3Q96II8 Y_RNA.262-201ENST00000364641 102 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 RNA5SP505-201ENST00000364748 108 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 RNU6-926P-201ENST00000384075 107 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 RNA5SP87-201ENST00000384155 118 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 MIR92A2-201ENST00000385299 75 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
LRCH3Q96II8 RNA5SP339-201ENST00000390987 122 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 AC099677.1-201ENST00000420575 175 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.13□□□□□ -1.43
LRCH3Q96II8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.13□□□□□ -1.43
LRCH3Q96II8 RANP8-201ENST00000444720 713 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 UQCRBP2-201ENST00000447827 297 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LRCH3Q96II8 AC010683.1-201ENST00000473673 378 ntBASIC6.13□□□□□ -1.43
LRCH3Q96II8 RPS26P21-201ENST00000475397 348 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms