Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 Y_RNA.259-201ENST00000364619 101 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-996P-201ENST00000365438 107 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-43P-201ENST00000384302 107 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RPL7P60-201ENST00000397636 735 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RPL31P52-201ENST00000407532 367 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AL590609.2-201ENST00000421430 368 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 DUTP6-201ENST00000425573 462 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 COX6B1P7-201ENST00000430845 235 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 GTF2IP13-201ENST00000438487 386 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AL163973.1-201ENST00000484753 577 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AC110792.2-201ENST00000510278 224 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-1170P-201ENST00000515974 106 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-410P-201ENST00000517006 107 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RNA5SP337-201ENST00000517007 109 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 AC098848.2-201ENST00000588023 330 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 SNRPGP17-201ENST00000603780 214 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 MTND5P33-201ENST00000571250 1450 ntBASIC4.88□□□□□ -1.63
SMARCC2Q8TAQ2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AL161781.1-201ENST00000354277 403 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 SNORD74.4-201ENST00000364129 80 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-606P-201ENST00000384721 111 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AL023807.1-201ENST00000407932 359 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-603P-201ENST00000411403 107 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC004975.1-201ENST00000428733 208 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC092013.1-201ENST00000438795 332 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 HSPE1P28-201ENST00000443139 211 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 DDX3P2-201ENST00000446138 111 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 RPS29P19-201ENST00000479709 171 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 KLHL2P1-201ENST00000508691 521 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 TXNP6-201ENST00000510190 310 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC093677.1-201ENST00000514414 678 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 TOMM20P2-201ENST00000540082 421 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 BNIP3P6-201ENST00000549284 499 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC025884.1-201ENST00000556034 378 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC012603.1-201ENST00000606424 528 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC103710.3-201ENST00000608157 948 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 MIR8059-201ENST00000620427 81 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 CR392039.4-201ENST00000624968 501 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 AC138305.3-201ENST00000624988 240 ntBASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.87□□□□□ -1.63
SMARCC2Q8TAQ2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 RNU6-254P-201ENST00000363377 107 ntBASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 Y_RNA.145-201ENST00000363527 102 ntBASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 DSTNP4-201ENST00000399472 474 ntBASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 AL356421.1-201ENST00000403255 413 ntBASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 RNA5SP104-201ENST00000410989 118 ntBASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 RPS15AP12-201ENST00000419498 388 ntBASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.86□□□□□ -1.63
SMARCC2Q8TAQ2 ELOCP18-201ENST00000434209 337 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms