Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 AL079305.1-201ENST00000623159 3008 ntBASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PRPF38BQ5VTL8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 Z75746.1-201ENST00000440243 2080 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 Y_RNA.237-201ENST00000364439 102 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 Y_RNA.297-201ENST00000364950 91 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 SNORA70H-201ENST00000383910 135 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 RNU6-76P-201ENST00000384060 104 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 SNORA70J-201ENST00000384182 135 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 Y_RNA.539-201ENST00000384635 107 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 Y_RNA.592-201ENST00000410274 109 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AL592045.1-201ENST00000429867 352 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 RPL23AP25-201ENST00000430973 463 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 RPL12P46-201ENST00000436610 195 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 NDUFB1P2-201ENST00000449477 176 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 RPL23AP40-201ENST00000487630 390 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC091167.1-201ENST00000492017 396 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC008958.1-201ENST00000511047 682 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC007016.1-201ENST00000512110 244 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 MIR4444-1-201ENST00000581696 74 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 MIR4444-2-201ENST00000584390 74 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC004792.1-201ENST00000614523 137 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC006133.1-201ENST00000617106 264 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 MAPK10-263ENST00000641052 4307 ntBASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.97□□□□□ -1.45
PRPF38BQ5VTL8 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PRPF38BQ5VTL8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
PRPF38BQ5VTL8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.96□□□□□ -1.45
PRPF38BQ5VTL8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PRPF38BQ5VTL8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PRPF38BQ5VTL8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.96□□□□□ -1.45
PRPF38BQ5VTL8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 MTND5P9-201ENST00000503854 1755 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AL353796.1-201ENST00000561542 3241 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 RNU6-708P-201ENST00000384217 107 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 U3.22-201ENST00000391120 215 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AP000275.1-201ENST00000411943 390 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 MYL6P5-201ENST00000412707 459 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC092573.2-201ENST00000434546 243 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 RN7SL352P-201ENST00000466002 277 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC010618.1-201ENST00000469924 477 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 RPS24P16-201ENST00000497294 392 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 SNORA67.7-201ENST00000516664 135 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 RNA5SP143-201ENST00000516936 115 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC091144.1-201ENST00000519573 138 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AL356218.2-201ENST00000605264 187 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC025574.2-201ENST00000615621 514 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AP001282.2-201ENST00000616149 309 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AC011944.2-201ENST00000624440 683 ntBASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRPF38BQ5VTL8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 RN7SKP224-201ENST00000364140 325 ntBASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 RNU6-882P-201ENST00000391025 103 ntBASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 RNU2-33P-201ENST00000410344 192 ntBASIC5.95□□□□□ -1.46
PRPF38BQ5VTL8 RNU6-130P-201ENST00000411112 103 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms