Protein–RNA interactions for Protein: Q16740

CLPP, ATP-dependent Clp protease proteolytic subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPPQ16740 AC068787.1-201ENST00000623908 691 ntBASIC3.13□□□□□ -1.91
CLPPQ16740 SCARNA15.3-201ENST00000626315 122 ntBASIC3.13□□□□□ -1.91
CLPPQ16740 SCARNA4.1-201ENST00000628597 123 ntBASIC3.13□□□□□ -1.91
CLPPQ16740 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CLPPQ16740 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
CLPPQ16740 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLPPQ16740 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CLPPQ16740 GNG5P1-201ENST00000255500 204 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 MIR422A-201ENST00000362286 90 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 SNORD56.5-201ENST00000364281 72 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CLPPQ16740 RPL21P32-201ENST00000419877 477 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPPQ16740 RPS25P9-201ENST00000435591 252 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC004866.2-201ENST00000438285 481 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPPQ16740 AL671855.1-201ENST00000446875 1203 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 SNORD11.1-201ENST00000459482 85 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC011825.1-201ENST00000484967 388 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 FAM172BP-201ENST00000487497 1089 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC108729.1-201ENST00000487812 947 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AP001025.2-201ENST00000490908 477 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC006445.1-201ENST00000491925 405 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.12□□□□□ -1.91
CLPPQ16740 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPPQ16740 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLPPQ16740 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPPQ16740 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.12□□□□□ -1.91
CLPPQ16740 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPPQ16740 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPPQ16740 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AL592221.1-201ENST00000605266 382 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPPQ16740 AC095031.1-201ENST00000623685 672 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPPQ16740 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CLPPQ16740 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPPQ16740 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
CLPPQ16740 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPPQ16740 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLPPQ16740 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 RNU6-173P-201ENST00000364215 104 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 MIR135A2-201ENST00000384854 100 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 MIR513B-201ENST00000385136 84 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 USP9YP33-201ENST00000412220 421 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 RPS15AP38-201ENST00000413110 372 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.11□□□□□ -1.91
CLPPQ16740 HMGB1P49-201ENST00000418882 569 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 USP9YP35-201ENST00000435696 412 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 MTND3P1-201ENST00000441336 220 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPPQ16740 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 AC020699.1-201ENST00000505161 445 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 AC093677.1-201ENST00000514414 678 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 RNA5SP341-201ENST00000516261 117 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 AP001372.4-201ENST00000524889 472 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.11□□□□□ -1.91
CLPPQ16740 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 MTCO3P13-201ENST00000577757 781 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 TUG1_1.1-201ENST00000610654 145 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.11□□□□□ -1.91
CLPPQ16740 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPPQ16740 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
CLPPQ16740 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLPPQ16740 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPPQ16740 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.1□□□□□ -1.91
CLPPQ16740 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLPPQ16740 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLPPQ16740 OR1S2-201ENST00000302592 978 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 RNA5SP139-201ENST00000364340 117 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 RNU1-109P-201ENST00000383960 147 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 RNU6-882P-201ENST00000391025 103 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPPQ16740 SSXP9-201ENST00000417503 292 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.1□□□□□ -1.91
CLPPQ16740 ZYG11AP1-201ENST00000430329 837 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPPQ16740 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPPQ16740 MTND5P14-201ENST00000441481 1267 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 FGF7P5-201ENST00000441829 291 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 AL121871.1-201ENST00000443413 436 ntBASIC3.1□□□□□ -1.91
CLPPQ16740 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms