Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC068533.1-201ENST00000418542 415 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AL109913.1-201ENST00000421173 514 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC093106.2-201ENST00000428212 385 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 HMGB1P27-201ENST00000431429 603 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC004938.1-201ENST00000438468 308 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 NEFMP1-201ENST00000443423 1006 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 CACYBPP2-201ENST00000453625 678 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.03□□□□□ -1.76
NKX6-1P78426 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC108078.2-201ENST00000510750 236 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 RNU6-352P-201ENST00000516908 107 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AF235103.2-201ENST00000525753 346 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX6-1P78426 CBX3P5-201ENST00000552017 521 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC068831.4-201ENST00000556118 109 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 MED28P6-201ENST00000558776 231 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC087477.6-201ENST00000559595 843 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC084783.1-201ENST00000565846 910 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 MIR3921-201ENST00000577308 85 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AP001029.3-201ENST00000588063 596 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC093227.2-201ENST00000589357 285 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.03□□□□□ -1.76
NKX6-1P78426 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC104763.2-201ENST00000604179 382 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 DUXAP9-208ENST00000622815 614 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX6-1P78426 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX6-1P78426 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NKX6-1P78426 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.77
NKX6-1P78426 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
NKX6-1P78426 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 MTND4P14-201ENST00000435799 1354 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX6-1P78426 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX6-1P78426 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 SNORA31-201ENST00000362607 130 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 RN7SKP44-201ENST00000363602 316 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 RNU6-1029P-201ENST00000384109 107 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX6-1P78426 MIR1290-201ENST00000408735 78 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 OR9R1P-201ENST00000412200 877 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX6-1P78426 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX6-1P78426 MTCYBP8-201ENST00000422855 651 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 PDSS1P1-201ENST00000422953 1114 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 EIF1P3-201ENST00000423841 334 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 CALM2P2-201ENST00000428512 440 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC020550.1-201ENST00000447385 163 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 FABP5P13-201ENST00000452144 328 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX6-1P78426 RPL23AP24-201ENST00000458203 385 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 RNU6-953P-201ENST00000459154 107 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 RPL7L1P8-201ENST00000469911 741 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 RPS29P25-201ENST00000481709 171 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC025465.4-201ENST00000513422 638 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 SNORA31.9-201ENST00000516429 84 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 RN7SKP258-201ENST00000517151 304 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AP001781.1-201ENST00000530977 207 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AC060780.3-201ENST00000589464 80 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AL049634.3-201ENST00000604968 457 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AC091979.2-201ENST00000607514 214 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AL355073.2-201ENST00000612106 557 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 ZYXP1-201ENST00000617638 118 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AC008785.1-201ENST00000624475 456 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 API5P2-201ENST00000397055 1498 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 AL359922.3-201ENST00000624779 1670 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 PRO1804-201ENST00000623780 2050 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NKX6-1P78426 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NKX6-1P78426 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NKX6-1P78426 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX6-1P78426 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX6-1P78426 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms