Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL732618.1-201ENST00000623251 301 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC091931.1-201ENST00000623488 728 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RHBDL3P58872 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
RHBDL3P58872 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 OR4G2P-202ENST00000641004 1759 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RHBDL3P58872 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDL3P58872 RNU6-533P-201ENST00000384144 107 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 SNORD115.1-201ENST00000391109 76 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 RPL7P25-201ENST00000404151 721 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 RNU6-1077P-201ENST00000410506 102 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 RNU2-62P-201ENST00000410868 191 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 RPL21P24-201ENST00000413752 448 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 USP9YP36-201ENST00000424581 829 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 BX890604.2-201ENST00000427883 474 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 TAAR7P-201ENST00000436141 242 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC118469.1-201ENST00000442943 488 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 GDI2P2-201ENST00000445131 608 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDL3P58872 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 U3.44-201ENST00000458938 192 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 AP000797.1-201ENST00000478870 387 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC109486.1-201ENST00000486833 374 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.28□□□□□ -1.72
RHBDL3P58872 RNA5SP291-201ENST00000517222 105 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 RPL12P22-201ENST00000519073 490 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDL3P58872 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDL3P58872 ATP5F1P5-201ENST00000526403 760 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 DEFB108A-201ENST00000530110 222 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AL031985.2-201ENST00000600955 480 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AL442067.2-201ENST00000614033 363 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC010133.1-201ENST00000615809 842 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AL138880.2-201ENST00000616214 239 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC009159.1-201ENST00000618386 642 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AL359715.5-201ENST00000623431 443 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC091905.1-201ENST00000624400 311 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
RHBDL3P58872 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDL3P58872 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC073346.2-201ENST00000624724 2058 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 SNORD116-8-201ENST00000384365 95 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RHBDL3P58872 RPL17P50-201ENST00000396131 546 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 RPS20P2-201ENST00000402520 389 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDL3P58872 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.27□□□□□ -1.73
RHBDL3P58872 AL390023.1-201ENST00000428836 262 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDL3P58872 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.27□□□□□ -1.73
RHBDL3P58872 AL445567.1-201ENST00000439121 144 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 HMGB3P22-202ENST00000451823 572 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC099563.1-201ENST00000456086 418 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDL3P58872 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDL3P58872 SETP11-201ENST00000473027 690 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 OR5BM1P-201ENST00000512021 366 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDL3P58872 IGHV3-76-201ENST00000522465 295 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDL3P58872 HMGB1P14-201ENST00000557424 591 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 MIR3915-201ENST00000578518 97 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC008507.1-201ENST00000587506 734 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 KC877982.1-201ENST00000602313 470 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AF131215.7-201ENST00000602443 707 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 AC008277.2-201ENST00000605196 797 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 SNHG22-203ENST00000617833 660 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDL3P58872 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RHBDL3P58872 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
RHBDL3P58872 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDL3P58872 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RHBDL3P58872 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RHBDL3P58872 TNPO1P3-201ENST00000436471 2662 ntBASIC4.27□□□□□ -1.73
RHBDL3P58872 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC110774.1-201ENST00000623567 2018 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms