Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL359740.1-201ENST00000624340 592 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC138649.5-201ENST00000637456 137 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN20P56880 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN20P56880 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 AC024560.2-201ENST00000507981 1497 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CLDN20P56880 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN20P56880 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CLDN20P56880 RNA5SP124-201ENST00000362739 110 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 U8.3-201ENST00000363321 132 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNU5A-8P-201ENST00000364102 114 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNY4P34-201ENST00000364779 95 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNA5SP167-201ENST00000365461 116 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN20P56880 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLDN20P56880 RNU6-882P-201ENST00000391025 103 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNU6-754P-201ENST00000391166 107 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 SOD2P1-201ENST00000396543 562 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNU6ATAC-201ENST00000408749 126 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNU2-43P-201ENST00000410306 190 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNU2-66P-201ENST00000410650 161 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN20P56880 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN20P56880 AL589872.1-201ENST00000426602 288 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC010975.2-201ENST00000427781 588 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 MTND1P34-201ENST00000438556 671 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 ATP5C1P1-201ENST00000441945 895 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 NPM1P49-201ENST00000448027 714 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN20P56880 snoU13.24-201ENST00000458998 104 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 SNORA84-201ENST00000459229 133 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AL133162.1-201ENST00000463228 453 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC010285.1-201ENST00000470580 392 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC084198.1-201ENST00000477747 402 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC023141.12-201ENST00000512399 199 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC026801.2-201ENST00000515352 425 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 SNORA70.14-201ENST00000516205 110 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 RNA5SP164-201ENST00000516533 110 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN20P56880 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN20P56880 AC007991.1-201ENST00000522680 631 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 MTCYBP20-201ENST00000524239 1129 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN20P56880 AC022880.1-201ENST00000534017 973 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AL133271.1-201ENST00000538229 291 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDN20P56880 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN20P56880 AC006270.2-201ENST00000578523 652 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 MIR3118-1-201ENST00000581787 76 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 ZNF415P1-201ENST00000582279 1166 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 NRBF2P1-201ENST00000587407 859 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN20P56880 SNORA62.6-201ENST00000606322 83 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN20P56880 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN20P56880 AL391813.2-201ENST00000609113 322 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC087241.4-201ENST00000612441 480 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC039056.2-201ENST00000622261 511 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 AC091953.2-201ENST00000623979 160 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN20P56880 AC092447.7-201ENST00000422212 1621 ntBASIC3.4□□□□□ -1.87
CLDN20P56880 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN20P56880 AP001350.1-201ENST00000601906 1524 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN20P56880 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN20P56880 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
CLDN20P56880 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN20P56880 Y_RNA.505-201ENST00000384489 102 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLDN20P56880 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 SSXP9-201ENST00000417503 292 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 C1DP2-201ENST00000418167 426 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 RPL31P12-201ENST00000422587 358 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN20P56880 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN20P56880 RPL21P112-201ENST00000434403 463 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 TIMM9P1-201ENST00000436122 256 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 MRPS31P2-201ENST00000451581 518 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 MTCYBP1-201ENST00000454315 1119 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.39□□□□□ -1.87
CLDN20P56880 AC108059.3-201ENST00000456388 214 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN20P56880 RNU7-59P-201ENST00000459101 61 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN20P56880 RPS3AP50-201ENST00000487064 803 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.39□□□□□ -1.87
CLDN20P56880 MTND2P33-201ENST00000506452 1031 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC005921.1-201ENST00000510589 286 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 RN7SKP209-201ENST00000516888 304 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 DUXAP2-201ENST00000519198 589 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC107934.1-201ENST00000522215 217 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN20P56880 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms