Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.19□□□□□ -1.9
PEX3P56589 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.19□□□□□ -1.9
PEX3P56589 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.19□□□□□ -1.9
PEX3P56589 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
PEX3P56589 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.19□□□□□ -1.9
PEX3P56589 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.19□□□□□ -1.9
PEX3P56589 SNRPGP15-201ENST00000600149 222 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AL139344.1-201ENST00000605228 195 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.19□□□□□ -1.9
PEX3P56589 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PEX3P56589 AC231657.1-201ENST00000624313 397 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AL049780.3-201ENST00000624612 1583 ntBASIC3.19□□□□□ -1.9
PEX3P56589 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PEX3P56589 AC087359.1-201ENST00000508335 1740 ntBASIC3.19□□□□□ -1.9
PEX3P56589 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AL022578.1-201ENST00000439330 1433 ntBASIC3.19□□□□□ -1.9
PEX3P56589 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.19□□□□□ -1.9
PEX3P56589 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PEX3P56589 RNU6-525P-201ENST00000363685 104 ntBASIC3.18□□□□□ -1.9
PEX3P56589 RNU6-837P-201ENST00000391056 108 ntBASIC3.18□□□□□ -1.9
PEX3P56589 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.18□□□□□ -1.9
PEX3P56589 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
PEX3P56589 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.18□□□□□ -1.9
PEX3P56589 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.18□□□□□ -1.9
PEX3P56589 MTND5P14-201ENST00000441481 1267 ntBASIC3.18□□□□□ -1.9
PEX3P56589 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
PEX3P56589 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.18□□□□□ -1.9
PEX3P56589 NPM1P49-201ENST00000448027 714 ntBASIC3.18□□□□□ -1.9
PEX3P56589 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.18□□□□□ -1.9
PEX3P56589 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.18□□□□□ -1.9
PEX3P56589 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.18□□□□□ -1.9
PEX3P56589 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.18□□□□□ -1.9
PEX3P56589 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PEX3P56589 UBTFL10-201ENST00000528532 562 ntBASIC3.18□□□□□ -1.9
PEX3P56589 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.18□□□□□ -1.9
PEX3P56589 AL163153.1-201ENST00000554223 283 ntBASIC3.18□□□□□ -1.9
PEX3P56589 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PEX3P56589 AC034105.3-201ENST00000565294 442 ntBASIC3.18□□□□□ -1.9
PEX3P56589 AC136618.2-201ENST00000575091 400 ntBASIC3.18□□□□□ -1.9
PEX3P56589 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
PEX3P56589 AL596245.1-201ENST00000618994 362 ntBASIC3.18□□□□□ -1.9
PEX3P56589 Z99129.2-201ENST00000619967 314 ntBASIC3.18□□□□□ -1.9
PEX3P56589 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PEX3P56589 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PEX3P56589 AL157700.1-201ENST00000561973 1432 ntBASIC3.18□□□□□ -1.9
PEX3P56589 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PEX3P56589 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
PEX3P56589 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
PEX3P56589 AC244517.1-201ENST00000606030 2086 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RNU6-777P-201ENST00000364265 104 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RNA5SP189-201ENST00000364920 115 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RNU2-15P-201ENST00000410692 191 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RNU4-78P-201ENST00000410940 126 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC098592.1-201ENST00000419352 333 ntBASIC3.17□□□□□ -1.9
PEX3P56589 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.17□□□□□ -1.9
PEX3P56589 RPS20P5-201ENST00000434808 360 ntBASIC3.17□□□□□ -1.9
PEX3P56589 MTCYBP34-201ENST00000439552 670 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.17□□□□□ -1.9
PEX3P56589 HSPE1P28-201ENST00000443139 211 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.17□□□□□ -1.9
PEX3P56589 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.17□□□□□ -1.9
PEX3P56589 AC092754.2-201ENST00000463506 460 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RPL21P8-201ENST00000465083 535 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RPS3AP14-201ENST00000483907 780 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.17□□□□□ -1.9
PEX3P56589 AC111000.2-201ENST00000507775 550 ntBASIC3.17□□□□□ -1.9
PEX3P56589 LTV1P1-201ENST00000510683 1237 ntBASIC3.17□□□□□ -1.9
PEX3P56589 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PEX3P56589 AC093677.1-201ENST00000514414 678 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RNU6-150P-201ENST00000516237 95 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.17□□□□□ -1.9
PEX3P56589 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.17□□□□□ -1.9
PEX3P56589 AC145350.1-201ENST00000567426 208 ntBASIC3.17□□□□□ -1.9
PEX3P56589 ISCA1P3-201ENST00000577104 373 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.17□□□□□ -1.9
PEX3P56589 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.17□□□□□ -1.9
PEX3P56589 AC011471.1-201ENST00000585766 187 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.17□□□□□ -1.9
PEX3P56589 AC018638.7-201ENST00000605836 1114 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AL390208.1-201ENST00000605885 644 ntBASIC3.17□□□□□ -1.9
PEX3P56589 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.17□□□□□ -1.9
PEX3P56589 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.17□□□□□ -1.9
PEX3P56589 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PEX3P56589 AL590240.3-201ENST00000621416 943 ntBASIC3.17□□□□□ -1.9
PEX3P56589 AC131159.1-201ENST00000621854 213 ntBASIC3.17□□□□□ -1.9
PEX3P56589 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PEX3P56589 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PEX3P56589 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
PEX3P56589 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.17□□□□□ -1.9
PEX3P56589 AC002546.1-201ENST00000588041 2504 ntBASIC3.17□□□□□ -1.9
PEX3P56589 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PEX3P56589 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.17□□□□□ -1.9
PEX3P56589 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 AC096644.4-201ENST00000563417 2912 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms