Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL136164.4-201ENST00000625013 2135 ntBASIC6.53□□□□□ -1.36
NUBP1P53384 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.53□□□□□ -1.36
NUBP1P53384 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NUBP1P53384 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NUBP1P53384 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.52□□□□□ -1.37
NUBP1P53384 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 RNU6-1205P-201ENST00000363625 106 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 RN7SKP62-201ENST00000384539 329 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 MIR548A3-201ENST00000385297 97 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 RN7SKP271-201ENST00000410528 320 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 AC074117.2-201ENST00000417130 397 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 RPL36P18-201ENST00000419316 318 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 RPL27AP8-201ENST00000424277 446 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 AL049745.1-201ENST00000433953 286 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 AC092824.1-201ENST00000483524 576 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 RNA5SP228-201ENST00000516232 133 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 Y_RNA.692-201ENST00000516627 105 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 RPL23AP53-201ENST00000521854 457 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC6.52□□□□□ -1.37
NUBP1P53384 AC106785.4-201ENST00000569492 412 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.52□□□□□ -1.37
NUBP1P53384 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.52□□□□□ -1.37
NUBP1P53384 AC020916.2-201ENST00000591242 360 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.52□□□□□ -1.37
NUBP1P53384 AC068768.2-201ENST00000602352 343 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.52□□□□□ -1.37
NUBP1P53384 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.52□□□□□ -1.37
NUBP1P53384 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.52□□□□□ -1.37
NUBP1P53384 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUBP1P53384 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
NUBP1P53384 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.51□□□□□ -1.37
NUBP1P53384 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
NUBP1P53384 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.51□□□□□ -1.37
NUBP1P53384 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NUBP1P53384 RNA5SP273-201ENST00000362484 113 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 RNU1-62P-201ENST00000362599 164 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AL034399.1-201ENST00000451535 380 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AL389915.2-201ENST00000454576 441 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AL591473.1-201ENST00000464297 313 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AC007215.1-201ENST00000464893 276 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 RN7SL382P-201ENST00000482631 282 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 RPS10P20-201ENST00000494130 463 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 Y_RNA.667-201ENST00000516212 107 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 SNORD33.1-201ENST00000516213 88 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 SAA3P-201ENST00000533267 365 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AC020895.1-201ENST00000595362 272 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AP005431.1-201ENST00000618479 319 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 snoZ196.1-201ENST00000625269 89 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 AP000550.3-201ENST00000637734 379 ntBASIC6.51□□□□□ -1.37
NUBP1P53384 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.51□□□□□ -1.37
NUBP1P53384 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.51□□□□□ -1.37
NUBP1P53384 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUBP1P53384 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 AC004925.1-201ENST00000624256 2706 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.5□□□□□ -1.37
NUBP1P53384 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NUBP1P53384 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.5□□□□□ -1.37
NUBP1P53384 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.5□□□□□ -1.37
NUBP1P53384 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.5□□□□□ -1.37
NUBP1P53384 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUBP1P53384 Y_RNA.294-201ENST00000364916 102 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 RNU6-1264P-201ENST00000383891 107 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 RPL21P17-201ENST00000397467 475 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 SPTLC1P2-201ENST00000407089 121 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 U3.43-201ENST00000410734 213 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 RN7SKP216-201ENST00000411050 312 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 RPL26P27-201ENST00000414397 437 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NUBP1P53384 AL590399.4-201ENST00000436561 601 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 AC244670.1-201ENST00000436879 112 ntBASIC6.5□□□□□ -1.37
NUBP1P53384 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NUBP1P53384 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.5□□□□□ -1.37
NUBP1P53384 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms