Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RABEPKP1-201ENST00000440529 1026 ntBASIC2.13□□□□□ -2.07
NUP98P52948 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP98P52948 AC090515.1-201ENST00000465295 476 ntBASIC2.13□□□□□ -2.07
NUP98P52948 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NUP98P52948 AC140059.1-201ENST00000489238 361 ntBASIC2.13□□□□□ -2.07
NUP98P52948 AP004371.1-201ENST00000525240 214 ntBASIC2.13□□□□□ -2.07
NUP98P52948 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.13□□□□□ -2.07
NUP98P52948 AL590282.1-201ENST00000610379 1136 ntBASIC2.13□□□□□ -2.07
NUP98P52948 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NUP98P52948 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP98P52948 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NUP98P52948 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP98P52948 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
NUP98P52948 RNU6-1293P-201ENST00000384077 107 ntBASIC2.12□□□□□ -2.07
NUP98P52948 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NUP98P52948 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
NUP98P52948 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.12□□□□□ -2.07
NUP98P52948 RSL24D1P2-201ENST00000445584 366 ntBASIC2.12□□□□□ -2.07
NUP98P52948 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP98P52948 RPS29P12-201ENST00000460178 152 ntBASIC2.12□□□□□ -2.07
NUP98P52948 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP98P52948 AC131902.3-201ENST00000611767 581 ntBASIC2.12□□□□□ -2.07
NUP98P52948 RNU6-156P-201ENST00000621869 107 ntBASIC2.12□□□□□ -2.07
NUP98P52948 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP98P52948 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP98P52948 RNU4-13P-201ENST00000364019 141 ntBASIC2.12□□□□□ -2.07
NUP98P52948 BX322784.1-201ENST00000455793 1077 ntBASIC2.12□□□□□ -2.07
NUP98P52948 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP98P52948 ARL4AP2-201ENST00000507378 601 ntBASIC2.12□□□□□ -2.07
NUP98P52948 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP98P52948 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP98P52948 RPS3AP4-201ENST00000555161 764 ntBASIC2.12□□□□□ -2.07
NUP98P52948 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
NUP98P52948 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP98P52948 GLUD1P4-201ENST00000590914 418 ntBASIC2.12□□□□□ -2.07
NUP98P52948 AC110792.4-201ENST00000609843 298 ntBASIC2.12□□□□□ -2.07
NUP98P52948 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP98P52948 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NUP98P52948 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP98P52948 RNU6-452P-201ENST00000384406 107 ntBASIC2.11□□□□□ -2.07
NUP98P52948 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.11□□□□□ -2.07
NUP98P52948 AC104689.1-201ENST00000473356 768 ntBASIC2.11□□□□□ -2.07
NUP98P52948 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.11□□□□□ -2.07
NUP98P52948 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.11□□□□□ -2.07
NUP98P52948 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP98P52948 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP98P52948 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP98P52948 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP98P52948 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP98P52948 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP98P52948 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.11□□□□□ -2.07
NUP98P52948 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP98P52948 AC008962.1-201ENST00000605729 304 ntBASIC2.11□□□□□ -2.07
NUP98P52948 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NUP98P52948 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP98P52948 AC010872.1-201ENST00000624225 675 ntBASIC2.11□□□□□ -2.07
NUP98P52948 MFSD8-245ENST00000641743 948 ntBASIC2.11□□□□□ -2.07
NUP98P52948 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NUP98P52948 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NUP98P52948 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NUP98P52948 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
NUP98P52948 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP98P52948 Y_RNA.164-201ENST00000363709 102 ntBASIC2.1□□□□□ -2.07
NUP98P52948 RNU6-98P-201ENST00000384173 107 ntBASIC2.1□□□□□ -2.07
NUP98P52948 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NUP98P52948 MCTS2P-201ENST00000394552 546 ntBASIC2.1□□□□□ -2.07
NUP98P52948 RNU6-1077P-201ENST00000410506 102 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AC073901.1-201ENST00000462471 408 ntBASIC2.1□□□□□ -2.07
NUP98P52948 RPS23P3-201ENST00000470993 430 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.1□□□□□ -2.07
NUP98P52948 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.1□□□□□ -2.07
NUP98P52948 SNORA31.11-201ENST00000516528 139 ntBASIC2.1□□□□□ -2.07
NUP98P52948 RNU6-56P-201ENST00000516986 93 ntBASIC2.1□□□□□ -2.07
NUP98P52948 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP98P52948 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP98P52948 YWHAQP7-201ENST00000603536 658 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AC019159.1-201ENST00000605094 187 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AL110115.1-201ENST00000614396 364 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.1□□□□□ -2.07
NUP98P52948 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.1□□□□□ -2.07
NUP98P52948 AC090897.3-201ENST00000636973 1157 ntBASIC2.1□□□□□ -2.07
NUP98P52948 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
NUP98P52948 TAS2R15P-201ENST00000390674 928 ntBASIC2.1□□□□□ -2.07
NUP98P52948 SFR1P1-201ENST00000403720 688 ntBASIC2.1□□□□□ -2.07
NUP98P52948 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP98P52948 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NUP98P52948 USP9YP10-201ENST00000454868 628 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP98P52948 MLLT10P2-201ENST00000506434 249 ntBASIC2.1□□□□□ -2.07
NUP98P52948 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.1□□□□□ -2.07
NUP98P52948 OR4P1P-201ENST00000530808 1136 ntBASIC2.1□□□□□ -2.07
NUP98P52948 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.1□□□□□ -2.07
NUP98P52948 AC023158.1-201ENST00000561632 1025 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP98P52948 AL391813.2-201ENST00000609113 322 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AL390240.1-201ENST00000612950 384 ntBASIC2.1□□□□□ -2.07
NUP98P52948 AC011890.2-201ENST00000613393 294 ntBASIC2.1□□□□□ -2.07
NUP98P52948 MIR6076-201ENST00000617521 113 ntBASIC2.1□□□□□ -2.07
NUP98P52948 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms