Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SNORD17-201ENST00000390930 237 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 SNORD115.1-201ENST00000391109 76 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 SNORA11.1-201ENST00000408133 129 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RNU2-28P-201ENST00000410457 189 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RN7SKP53-201ENST00000411337 315 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 BX842559.1-201ENST00000419615 532 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA11P31270 DPPA2P1-201ENST00000428060 556 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA11P31270 AL121601.2-201ENST00000438019 707 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 GDI2P2-201ENST00000445131 608 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 MEMO1P3-201ENST00000459811 302 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RPL31P58-201ENST00000469001 379 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA11P31270 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA11P31270 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA11P31270 AC022447.3-201ENST00000506865 495 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AC109635.4-202ENST00000531666 412 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA11P31270 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA11P31270 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA11P31270 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA11P31270 BNIP3P8-201ENST00000597863 560 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA11P31270 PRELID3BP8-201ENST00000604148 295 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AL161729.4-201ENST00000604650 476 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AC110741.2-201ENST00000605278 268 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA11P31270 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA11P31270 AL355365.1-201ENST00000616480 294 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AC068722.2-201ENST00000618734 544 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA11P31270 AC124864.2-201ENST00000624736 186 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
HOXA11P31270 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA11P31270 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HOXA11P31270 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA11P31270 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXA11P31270 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA11P31270 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 Y_RNA.493-201ENST00000384422 102 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXA11P31270 RPL31P1-201ENST00000398116 372 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 FGF7P8-201ENST00000402994 292 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.85□□□□□ -1.79
HOXA11P31270 HMGB3P23-201ENST00000414981 585 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 TIMM9P3-201ENST00000428659 274 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 SNRPEP7-201ENST00000438350 220 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 PSPHP1-201ENST00000450062 261 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 USP9YP12-201ENST00000450481 570 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 AL121769.1-201ENST00000469473 401 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 RPS3AP17-201ENST00000472594 777 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 AC108078.1-201ENST00000508073 725 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA11P31270 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 IGKV2-23-201ENST00000518729 323 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 HSPA8P13-201ENST00000523715 472 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AC107016.1-201ENST00000550463 337 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA11P31270 MIR5186-201ENST00000577504 120 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 KLKP1-201ENST00000595979 403 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.85□□□□□ -1.79
HOXA11P31270 AC112191.3-201ENST00000604371 277 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AL590282.1-201ENST00000610379 1136 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 AL592295.2-201ENST00000612578 206 ntBASIC3.85□□□□□ -1.79
HOXA11P31270 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
HOXA11P31270 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA11P31270 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXA11P31270 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HOXA11P31270 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA11P31270 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA11P31270 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HOXA11P31270 AC117529.2-201ENST00000512159 2068 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 FRG1CP-201ENST00000358464 769 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 RNA5SP295-201ENST00000362655 121 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 RNA5SP267-201ENST00000364893 126 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 Y_RNA.390-201ENST00000383932 102 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 RNU6-921P-201ENST00000384361 107 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 U8.14-201ENST00000390843 143 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 AP000567.1-201ENST00000406413 156 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 U3.39-201ENST00000408569 239 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.84□□□□□ -1.79
HOXA11P31270 Y_RNA.608-201ENST00000410647 95 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 RPS3AP3-201ENST00000411933 242 ntBASIC3.84□□□□□ -1.79
HOXA11P31270 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms