Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO1P25800 AC098591.2-201ENST00000510152 315 ntBASIC3.88□□□□□ -1.79
LMO1P25800 MTND5P4-201ENST00000514978 288 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC104057.1-201ENST00000515547 497 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNU6-138P-201ENST00000515952 107 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC009902.1-201ENST00000519351 183 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC068587.4-201ENST00000533893 186 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO1P25800 RRN3P3-201ENST00000549207 578 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC068831.4-201ENST00000556118 109 ntBASIC3.88□□□□□ -1.79
LMO1P25800 MIR3682-201ENST00000581338 84 ntBASIC3.88□□□□□ -1.79
LMO1P25800 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 AL133338.2-201ENST00000604292 736 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNU6-89P-201ENST00000606519 100 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC004696.1-201ENST00000614345 607 ntBASIC3.88□□□□□ -1.79
LMO1P25800 LINC00901.1-201ENST00000617252 152 ntBASIC3.88□□□□□ -1.79
LMO1P25800 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 ERCC6-202ENST00000374127 1782 ntBASIC3.88□□□□□ -1.79
LMO1P25800 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO1P25800 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
LMO1P25800 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO1P25800 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO1P25800 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
LMO1P25800 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.87□□□□□ -1.79
LMO1P25800 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LMO1P25800 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 MIR448-201ENST00000362131 111 ntBASIC3.87□□□□□ -1.79
LMO1P25800 Y_RNA.180-201ENST00000363867 113 ntBASIC3.87□□□□□ -1.79
LMO1P25800 U3.12-201ENST00000364498 214 ntBASIC3.87□□□□□ -1.79
LMO1P25800 RHOT1P2-201ENST00000366423 333 ntBASIC3.87□□□□□ -1.79
LMO1P25800 Y_RNA.556-201ENST00000384677 113 ntBASIC3.87□□□□□ -1.79
LMO1P25800 PCNPP3-201ENST00000393579 471 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AL445529.1-201ENST00000398713 389 ntBASIC3.87□□□□□ -1.79
LMO1P25800 RPS20P2-201ENST00000402520 389 ntBASIC3.87□□□□□ -1.79
LMO1P25800 RPS16P5-201ENST00000406501 404 ntBASIC3.87□□□□□ -1.79
LMO1P25800 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.87□□□□□ -1.79
LMO1P25800 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 RNU2-21P-201ENST00000410368 188 ntBASIC3.87□□□□□ -1.79
LMO1P25800 RN7SKP158-201ENST00000410453 326 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 RPL12P46-201ENST00000436610 195 ntBASIC3.87□□□□□ -1.79
LMO1P25800 SNRPEP7-201ENST00000438350 220 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 AC011753.3-201ENST00000443436 406 ntBASIC3.87□□□□□ -1.79
LMO1P25800 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.87□□□□□ -1.79
LMO1P25800 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.87□□□□□ -1.79
LMO1P25800 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.87□□□□□ -1.79
LMO1P25800 RPS29P33-201ENST00000456717 146 ntBASIC3.87□□□□□ -1.79
LMO1P25800 snoU13.7-201ENST00000459220 104 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.87□□□□□ -1.79
LMO1P25800 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 RNU6-1213P-201ENST00000517075 94 ntBASIC3.87□□□□□ -1.79
LMO1P25800 IGLV3-26-201ENST00000520756 302 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AC090151.1-201ENST00000520784 730 ntBASIC3.87□□□□□ -1.79
LMO1P25800 SUMO2P20-201ENST00000520803 283 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AP000827.1-201ENST00000527814 258 ntBASIC3.87□□□□□ -1.79
LMO1P25800 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 MIR5186-201ENST00000577504 120 ntBASIC3.87□□□□□ -1.79
LMO1P25800 MIR4512-201ENST00000583257 77 ntBASIC3.87□□□□□ -1.79
LMO1P25800 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AC234771.5-201ENST00000600161 514 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AL031320.1-201ENST00000604177 357 ntBASIC3.87□□□□□ -1.79
LMO1P25800 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.87□□□□□ -1.79
LMO1P25800 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.87□□□□□ -1.79
LMO1P25800 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 AC141273.2-201ENST00000618989 130 ntBASIC3.87□□□□□ -1.79
LMO1P25800 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 CDC27P3-201ENST00000635418 1910 ntBASIC3.87□□□□□ -1.79
LMO1P25800 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 AL356489.2-201ENST00000566968 3528 ntBASIC3.87□□□□□ -1.79
LMO1P25800 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO1P25800 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.87□□□□□ -1.79
LMO1P25800 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LMO1P25800 MTND5P7-201ENST00000413558 1798 ntBASIC3.86□□□□□ -1.79
LMO1P25800 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMO1P25800 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LMO1P25800 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMO1P25800 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMO1P25800 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms