Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPL7P28-201ENST00000437739 740 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AL359955.2-201ENST00000445380 353 ntBASIC4.54□□□□□ -1.68
ATF4P18848 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.54□□□□□ -1.68
ATF4P18848 SDC4P-201ENST00000453285 601 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.54□□□□□ -1.68
ATF4P18848 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.54□□□□□ -1.68
ATF4P18848 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF4P18848 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF4P18848 RNA5SP497-201ENST00000516081 97 ntBASIC4.54□□□□□ -1.68
ATF4P18848 RNU1-61P-201ENST00000516107 151 ntBASIC4.54□□□□□ -1.68
ATF4P18848 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATF4P18848 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF4P18848 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF4P18848 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF4P18848 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.54□□□□□ -1.68
ATF4P18848 AL512624.1-201ENST00000613638 469 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AL096712.1-201ENST00000614561 159 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AC015914.2-201ENST00000618167 288 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AC118273.1-201ENST00000525324 3006 ntBASIC4.54□□□□□ -1.68
ATF4P18848 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATF4P18848 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATF4P18848 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ATF4P18848 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF4P18848 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF4P18848 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF4P18848 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATF4P18848 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATF4P18848 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATF4P18848 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATF4P18848 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATF4P18848 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATF4P18848 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 SNORA21-201ENST00000362423 132 ntBASIC4.53□□□□□ -1.68
ATF4P18848 RNU1-136P-201ENST00000384181 164 ntBASIC4.53□□□□□ -1.68
ATF4P18848 Y_RNA.579-201ENST00000390939 94 ntBASIC4.53□□□□□ -1.68
ATF4P18848 ARL4AP5-201ENST00000404372 599 ntBASIC4.53□□□□□ -1.68
ATF4P18848 HSPE1P26-201ENST00000405341 275 ntBASIC4.53□□□□□ -1.68
ATF4P18848 U3.42-201ENST00000408746 214 ntBASIC4.53□□□□□ -1.68
ATF4P18848 RNU2-37P-201ENST00000410695 177 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AC096921.1-201ENST00000411661 375 ntBASIC4.53□□□□□ -1.68
ATF4P18848 HMGN1P20-201ENST00000411849 300 ntBASIC4.53□□□□□ -1.68
ATF4P18848 ATG3P1-201ENST00000419507 911 ntBASIC4.53□□□□□ -1.68
ATF4P18848 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.53□□□□□ -1.68
ATF4P18848 AL158071.1-201ENST00000430315 461 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATF4P18848 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.53□□□□□ -1.68
ATF4P18848 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.53□□□□□ -1.68
ATF4P18848 ANP32BP2-201ENST00000454525 545 ntBASIC4.53□□□□□ -1.68
ATF4P18848 Y_RNA.653-201ENST00000459091 95 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AC084357.1-201ENST00000473404 255 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AC011005.2-201ENST00000487324 359 ntBASIC4.53□□□□□ -1.68
ATF4P18848 FTH1P9-201ENST00000513251 355 ntBASIC4.53□□□□□ -1.68
ATF4P18848 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.53□□□□□ -1.68
ATF4P18848 RNA5SP434-201ENST00000516647 121 ntBASIC4.53□□□□□ -1.68
ATF4P18848 RNU6-1016P-201ENST00000516689 94 ntBASIC4.53□□□□□ -1.68
ATF4P18848 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AP005597.4-201ENST00000526762 229 ntBASIC4.53□□□□□ -1.68
ATF4P18848 APOOP3-201ENST00000536787 586 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.53□□□□□ -1.68
ATF4P18848 AC093249.1-201ENST00000567049 203 ntBASIC4.53□□□□□ -1.68
ATF4P18848 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.53□□□□□ -1.68
ATF4P18848 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.53□□□□□ -1.68
ATF4P18848 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.53□□□□□ -1.68
ATF4P18848 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.53□□□□□ -1.68
ATF4P18848 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.53□□□□□ -1.68
ATF4P18848 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATF4P18848 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
ATF4P18848 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
ATF4P18848 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ATF4P18848 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.52□□□□□ -1.69
ATF4P18848 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 AC007685.1-201ENST00000329806 452 ntBASIC4.52□□□□□ -1.69
ATF4P18848 OR1L6-202ENST00000373684 1044 ntBASIC4.52□□□□□ -1.69
ATF4P18848 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 RNU6-43P-201ENST00000384302 107 ntBASIC4.52□□□□□ -1.69
ATF4P18848 SNORD116-29-201ENST00000384516 83 ntBASIC4.52□□□□□ -1.69
ATF4P18848 MIR34A-201ENST00000385130 110 ntBASIC4.52□□□□□ -1.69
ATF4P18848 RNA5SP91-201ENST00000390902 119 ntBASIC4.52□□□□□ -1.69
ATF4P18848 AL590004.1-201ENST00000405321 300 ntBASIC4.52□□□□□ -1.69
ATF4P18848 Y_RNA.623-201ENST00000411128 95 ntBASIC4.52□□□□□ -1.69
ATF4P18848 RNU6-954P-201ENST00000411355 107 ntBASIC4.52□□□□□ -1.69
ATF4P18848 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 UBE2D3P2-201ENST00000424409 445 ntBASIC4.52□□□□□ -1.69
ATF4P18848 RPL7P37-201ENST00000425095 738 ntBASIC4.52□□□□□ -1.69
ATF4P18848 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 AC007560.1-201ENST00000426912 237 ntBASIC4.52□□□□□ -1.69
ATF4P18848 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 AL627311.1-201ENST00000431514 115 ntBASIC4.52□□□□□ -1.69
ATF4P18848 AL645568.3-201ENST00000433683 316 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms